diff --git a/scripts/boz_parameters_job.sh b/scripts/boz_parameters_job.sh index 74dc4401cf86c0d89f3443db5d87e24a20dee811..e180b0bb55c8deb9b6270ab093d8a7126155c5f2 100644 --- a/scripts/boz_parameters_job.sh +++ b/scripts/boz_parameters_job.sh @@ -18,7 +18,11 @@ module load exfel module load exfel_anaconda3/1.1 echo processing run $RUN -mkdir ../../processed_runs/r$RUN -papermill 'BOZ analysis part I parameters determination.ipynb' ../../processed_runs/r$RUN/output.ipynb \ +PDIR=$(find-proposal $PROPOSAL) +RDIR="$PDIR/usr/processed_runs/r$(printf '%04d' $RUN)" +mkdir $RDIR + +papermill 'BOZ analysis part I parameters determination.ipynb' \ + $RDIR/output.ipynb \ -p proposal $PROPOSAL -p darkrun $DARK -p run $RUN -p module $MODULE \ -p gain $GAIN -p rois_th $ROISTH -p sat_level $SATLEVEL -k xfel