diff --git a/scripts/start_job_single.sh b/scripts/start_job_single.sh index 68e97d6486ca5f90d19b986458523d8aac4c884c..d3934e9a0b522432006b7c8147d6768b2e948d09 100755 --- a/scripts/start_job_single.sh +++ b/scripts/start_job_single.sh @@ -9,5 +9,9 @@ RUN=$1 MODULES=$2 RUNTYPE=$3 +source /etc/profile.d/modules.sh +module load exfel +module load exfel_anaconda3/1.1 + echo processing modules $MODULES of run $RUN python process_data_201007_23h.py --run-number $RUN --module ${MODULES} --runtype $RUNTYPE diff --git a/scripts/start_processing_all.sh b/scripts/start_processing_all.sh index 681315e8372a482598a079512a3795b78a4c94f9..f0fba41a6f57b748d30194f5e60769e288dba364 100755 --- a/scripts/start_processing_all.sh +++ b/scripts/start_processing_all.sh @@ -4,10 +4,12 @@ RUN=$1 RUNTYPE=$2 if [ $RUN ] && [ $RUNTYPE ] - then + then echo processing run $RUN -# module load exfel -# module load exfel_anaconda3/1.1 + source /etc/profile.d/modules.sh + module load exfel + module load exfel_anaconda3/1.1 + sbatch ./start_job_single.sh $RUN '0 1 2 3' $RUNTYPE sbatch ./start_job_single.sh $RUN '4 5 6 7' $RUNTYPE sbatch ./start_job_single.sh $RUN '8 9 10 11' $RUNTYPE @@ -16,4 +18,4 @@ if [ $RUN ] && [ $RUNTYPE ] echo please specify a run number and type echo available runtypes: echo energyscan, energyscan_pumped, static, static_IR, delayscan, timescan -fi \ No newline at end of file +fi