From 2f81a439bb3e57e85c854bc893694625abadee0d Mon Sep 17 00:00:00 2001
From: ahmedk <karim.ahmed@xfel.eu>
Date: Wed, 19 Jan 2022 14:26:30 +0100
Subject: [PATCH] plot first cell in burst and single cell
---
.../Jungfrau_Gain_Correct_and_Verify_NBC.ipynb | 13 ++++---------
1 file changed, 4 insertions(+), 9 deletions(-)
diff --git a/notebooks/Jungfrau/Jungfrau_Gain_Correct_and_Verify_NBC.ipynb b/notebooks/Jungfrau/Jungfrau_Gain_Correct_and_Verify_NBC.ipynb
index c511a587b..4189dd347 100644
--- a/notebooks/Jungfrau/Jungfrau_Gain_Correct_and_Verify_NBC.ipynb
+++ b/notebooks/Jungfrau/Jungfrau_Gain_Correct_and_Verify_NBC.ipynb
@@ -320,7 +320,7 @@
" if memory_cells == 1:\n",
" g_data[index, ...] = g\n",
" else:\n",
- " g_data[index, ...] = g[1, ...]\n",
+ " g_data[index, ...] = g[0, ...]\n",
" # Select memory cells\n",
" \n",
" # TODO: This needs to be revisited.\n",
@@ -411,7 +411,6 @@
" print(f\"\\t- WARNING: No image data for {ofile_name}: data shape is {dshape}\")\n",
" continue\n",
"\n",
- " sensor_size = dshape[1:]\n",
" # load number of data available, including trains with empty data.\n",
" n_trains = len(seq_dc.train_ids)\n",
"\n",
@@ -483,13 +482,9 @@
"\n",
" # Prepare plotting arrays\n",
" step_timer.start()\n",
- " if memory_cells == 1:\n",
- " fim_data[local_karabo_da] = data_corr[:plt_images, 0, ...].copy()\n",
- " msk_data[local_karabo_da] = mask_corr[:plt_images, 0, ...].copy()\n",
- " else:\n",
- " fim_data[local_karabo_da] = data_corr[:plt_images, 1, ...].copy()\n",
- " msk_data[local_karabo_da] = mask_corr[:plt_images, 1, ...].copy()\n",
- "\n",
+ " # TODO: Print out which cell is being selected for plotting\n",
+ " fim_data[local_karabo_da] = data_corr[:plt_images, 0, ...].copy()\n",
+ " msk_data[local_karabo_da] = mask_corr[:plt_images, 0, ...].copy()\n",
" gim_data[local_karabo_da] = g_data\n",
" rim_data[local_karabo_da] = r_data\n",
" step_timer.done_step(f'Preparing plotting data of {plt_images} images:.')"
--
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