diff --git a/notebooks/Jungfrau/Jungfrau_Gain_Correct_and_Verify_NBC.ipynb b/notebooks/Jungfrau/Jungfrau_Gain_Correct_and_Verify_NBC.ipynb index 7ab1613d4bc28c294a532d4b4949ed975129362c..9bacba7d38bf9ea43fafa123ec0c248664c59f56 100644 --- a/notebooks/Jungfrau/Jungfrau_Gain_Correct_and_Verify_NBC.ipynb +++ b/notebooks/Jungfrau/Jungfrau_Gain_Correct_and_Verify_NBC.ipynb @@ -125,8 +125,10 @@ "\n", "output_source_template = output_source_template or input_source_template\n", "\n", - "input_src = input_source_template.format(karabo_id, receiver_template)\n", - "output_src = output_source_template.format(karabo_id, receiver_template)\n", + "input_src = input_source_template.format(\n", + " karabo_id=karabo_id, receiver=receiver_template)\n", + "output_src = output_source_template.format(\n", + " karabo_id=karabo_id, receiver=receiver_template)\n", "out_folder.mkdir(parents=True, exist_ok=True)\n", "\n", "print(f\"Run is: {run}\")\n", @@ -695,7 +697,7 @@ " # Create INDEX datasets.\n", " outp_file.create_index(seq_dc.train_ids, from_file=seq_file)\n", "\n", - " # Create METDATA datasets\n", + " # Create METADATA datasets\n", " outp_file.create_metadata(\n", " like=seq_dc,\n", " sequence=seq_file.sequence,\n", @@ -732,8 +734,7 @@ " save_reduced_rois(outp_file, data_corr, mask_corr, local_karabo_da)\n", "\n", " if output_src != input_src:\n", - " outp_file[f'/INSTRUMENT/{input_src_kda}'] = h5py.SoftLink(f'/INSTRUMENT/{output_src_kda}')\n", - " outp_file[f'/INDEX/{input_src_kda}'] = h5py.SoftLink(f'/INDEX/{output_src_kda}')\n", + " outp_file.create_legacy_source(input_src, output_src)\n", "\n", " step_timer.done_step(f'Saving data time.')\n", "if empty_seq == sum([len(i) for i in mapped_files.values()]):\n",