diff --git a/xfel_calibrate/calibrate.py b/xfel_calibrate/calibrate.py index 9319c304644e67686962232c75154deb7d8d8de7..78738dcc716c42a2f928ca1ef5706e4e2cc40401 100755 --- a/xfel_calibrate/calibrate.py +++ b/xfel_calibrate/calibrate.py @@ -503,15 +503,15 @@ def create_finalize_script(fmt_args, temp_path, job_list): :param temp_path: Path to temporary folder to run slurm job :param job_list: List of slurm jobs """ - tmpl = Template(''' + tmpl = Template("""#!/usr/bin/env python3 import sys from xfel_calibrate.finalize import finalize - finalize(joblist={{joblist}}, + finalize(joblist={{joblist}}, finaljob=sys.argv[1], run_path='{{run_path}}', out_path='{{out_path}}', - project='{{project}}', + project='{{project}}', calibration='{{calibration}}', author='{{author}}', version='{{version}}', @@ -519,8 +519,8 @@ def create_finalize_script(fmt_args, temp_path, job_list): data_path='{{in_folder}}', request_time='{{request_time}}', submission_time='{{submission_time}}') - - ''') + + """) fmt_args['joblist'] = job_list f_name = os.path.join(temp_path, "finalize.py")