From 74a72920ef8292060fb512c3f1a8a6951ddc2563 Mon Sep 17 00:00:00 2001
From: Thomas Kluyver <thomas.kluyver@xfel.eu>
Date: Tue, 26 Nov 2024 15:30:40 +0100
Subject: [PATCH] Ignore missing sources when finding memory cell patterns
---
src/cal_tools/lpdlib.py | 8 ++++++--
1 file changed, 6 insertions(+), 2 deletions(-)
diff --git a/src/cal_tools/lpdlib.py b/src/cal_tools/lpdlib.py
index 6d0054ef3..eec0c11b4 100644
--- a/src/cal_tools/lpdlib.py
+++ b/src/cal_tools/lpdlib.py
@@ -4,7 +4,7 @@ from typing import Optional
from warnings import warn
import numpy as np
-from extra_data import RunDirectory
+from extra_data import RunDirectory, SourceNameError
def get_mem_cell_pattern(run, sources) -> np.ndarray:
@@ -15,7 +15,11 @@ def get_mem_cell_pattern(run, sources) -> np.ndarray:
"""
patterns = []
for source in sources:
- cell_id_data = run[source, 'image.cellId'].drop_empty_trains()
+ try:
+ cell_id_data = run[source, 'image.cellId'].drop_empty_trains()
+ except SourceNameError:
+ continue # Source missing
+
if len(cell_id_data.train_ids) == 0:
continue # No data for this module
cell_ids = cell_id_data[0].ndarray().flatten()
--
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