From 7a5b59e08883438b584fdafc6e7611b68f751ccc Mon Sep 17 00:00:00 2001
From: Ebad Kamil <ebad.kamil@xfel.eu>
Date: Thu, 29 Oct 2020 14:35:05 +0100
Subject: [PATCH] Bugfix: report generation through finalize
---
xfel_calibrate/calibrate.py | 7 ++++---
1 file changed, 4 insertions(+), 3 deletions(-)
diff --git a/xfel_calibrate/calibrate.py b/xfel_calibrate/calibrate.py
index 78738dcc7..a1572c7b9 100755
--- a/xfel_calibrate/calibrate.py
+++ b/xfel_calibrate/calibrate.py
@@ -503,7 +503,8 @@ def create_finalize_script(fmt_args, temp_path, job_list):
:param temp_path: Path to temporary folder to run slurm job
:param job_list: List of slurm jobs
"""
- tmpl = Template("""#!/usr/bin/env python3
+ tmpl = Template("""\
+ #!/usr/bin/env python3
import sys
from xfel_calibrate.finalize import finalize
@@ -722,12 +723,12 @@ def make_par_table(parms, run_tmp_path):
col_type[1] = col_type[2]
tmpl = Template('''
- Input of the calibration pipeline
+ Input of the calibration pipeline
=================================
.. raw:: latex
- \\begin{longtable}{ {% for k in p %}{{k}}{%- endfor %} }
+ \\begin{longtable}{ {% for k in p %}{{k}}{%- endfor %} }
\hline
{% for k in lines %}
{{ k[0] }} & {{ k[1] }} & {{ k[2] }} \\\\
--
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