From 9657c2b6e80bc85ae0a67875d91adc2541cb3ed9 Mon Sep 17 00:00:00 2001
From: ahmedk <karim.ahmed@xfel.eu>
Date: Tue, 2 Aug 2022 13:40:56 +0200
Subject: [PATCH] exclude 1st 20 pulses from badpixels processing
---
.../Gotthard2/Characterize_Darks_Gotthard2_NBC.ipynb | 12 ++++++------
1 file changed, 6 insertions(+), 6 deletions(-)
diff --git a/notebooks/Gotthard2/Characterize_Darks_Gotthard2_NBC.ipynb b/notebooks/Gotthard2/Characterize_Darks_Gotthard2_NBC.ipynb
index 320f8d50b..681022ce9 100644
--- a/notebooks/Gotthard2/Characterize_Darks_Gotthard2_NBC.ipynb
+++ b/notebooks/Gotthard2/Characterize_Darks_Gotthard2_NBC.ipynb
@@ -17,11 +17,11 @@
"metadata": {},
"outputs": [],
"source": [
- "in_folder = \"/gpfs/exfel/exp/FXE/202221/p003225/raw\" # the folder to read data from, required\n",
+ "in_folder = \"/gpfs/exfel/exp/FXE/202231/p900298/raw\" # the folder to read data from, required\n",
"out_folder = \"/gpfs/exfel/data/scratch/ahmedk/test/gotthard2/darks\" # the folder to output to, required\n",
- "run_high = 50 # run number for G0 dark run, required\n",
- "run_med = 51 # run number for G1 dark run, required\n",
- "run_low = 52 # run number for G2 dark run, required\n",
+ "run_high = 7 # run number for G0 dark run, required\n",
+ "run_med = 8 # run number for G1 dark run, required\n",
+ "run_low = 9 # run number for G2 dark run, required\n",
"\n",
"# Parameters used to access raw data.\n",
"karabo_id = \"FXE_XAD_G2XES\" # karabo prefix of Gotthard-II devices\n",
@@ -348,8 +348,8 @@
"\n",
" # Split even and odd gain data.\n",
" data_gain = dc[instr_mod_src, \"data.gain\"].ndarray()\n",
- " even_gain = data_gain[:, ::2, :]\n",
- " odd_gain = data_gain[:, 1::2, :]\n",
+ " even_gain = data_gain[:, 20::2, :]\n",
+ " odd_gain = data_gain[:, 21::2, :]\n",
" raw_g = 3 if gain == 2 else gain\n",
"\n",
" def badpixels_cell(wid, index, g):\n",
--
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