From 9fd52cf59fba31d86c78c6efc686432f320da263 Mon Sep 17 00:00:00 2001
From: ahmedk <karim.ahmed@xfel.eu>
Date: Tue, 18 Jan 2022 10:52:30 +0100
Subject: [PATCH] Fix: [AGIPD][DARK] index out of range in case of running for
one module
---
.../AGIPD/Characterize_AGIPD_Gain_Darks_NBC.ipynb | 14 +++++++-------
1 file changed, 7 insertions(+), 7 deletions(-)
diff --git a/notebooks/AGIPD/Characterize_AGIPD_Gain_Darks_NBC.ipynb b/notebooks/AGIPD/Characterize_AGIPD_Gain_Darks_NBC.ipynb
index dd69492ab..8043f4a21 100644
--- a/notebooks/AGIPD/Characterize_AGIPD_Gain_Darks_NBC.ipynb
+++ b/notebooks/AGIPD/Characterize_AGIPD_Gain_Darks_NBC.ipynb
@@ -337,12 +337,11 @@
"# print(f\"Will process a total of {total_files} files ({total_file_size:.02f} GB).\")\n",
"\n",
"# TODO: Remove all of this nonsense with Extra-data.\n",
- "inp = [None] * 3 * len(modules)\n",
+ "inp = []\n",
"for gain_index, (gain, qm_file_map) in enumerate(gain_mapped_files.items()):\n",
- " gain_input = []\n",
+ " selected_inp = None\n",
" for module_index in modules:\n",
" max_n_imgs = 0\n",
- " inp_idx = gain_index * len(modules) + module_index\n",
" qm = module_index_to_qm(module_index)\n",
" if qm not in qm_file_map:\n",
" print(f\"Did not find files for {qm}\")\n",
@@ -355,15 +354,16 @@
" with h5py.File(filename, \"r\") as fin:\n",
" n_imgs = fin[h5path.format(module_index)+\"/trainId\"].shape[0]\n",
" if n_imgs != 0 and n_imgs > max_n_imgs:\n",
- " inp[inp_idx] = (filename, module_index, gain_index)\n",
+ " selected_inp = (filename, module_index, gain_index)\n",
" max_n_imgs = n_imgs\n",
- " print(f\"Process {inp[inp_idx][0]} for {qm}\")\n",
- " if inp[inp_idx] is None:\n",
+ " print(f\"Process {selected_inp[0]} for {qm}\")\n",
+ " inp.append(selected_inp)\n",
+ " if selected_inp is None:\n",
" raise ValueError(\n",
" \"No images to process for run: \"\n",
" f\"{[v for v in offset_runs.values()][gain_index]}\"\n",
" )\n",
- "inp = [x for x in inp if x is not None]\n",
+ "\n",
"total_files = len(inp)"
]
},
--
GitLab