diff --git a/notebooks/Timepix/Compute_Timepix_Event_Centroids.ipynb b/notebooks/Timepix/Compute_Timepix_Event_Centroids.ipynb index 3339f6a50ddbc115867a881ea4dcbda00ce65605..cef257718b75584929e36a7e5f672eb3044cadf3 100755 --- a/notebooks/Timepix/Compute_Timepix_Event_Centroids.ipynb +++ b/notebooks/Timepix/Compute_Timepix_Event_Centroids.ipynb @@ -8,9 +8,9 @@ "outputs": [], "source": [ "# Data selection parameters.\n", - "run = 420\n", - "in_folder = '/gpfs/exfel/exp/SQS/202230/p900256/raw'\n", - "out_folder = '/gpfs/exfel/exp/SQS/202230/p900256/scratch/cal_test'\n", + "run = 420 # required\n", + "in_folder = '/gpfs/exfel/exp/SQS/202230/p900256/raw' # required\n", + "out_folder = '/gpfs/exfel/exp/SQS/202230/p900256/scratch/cal_test' # required\n", "proposal = '' # Proposal, leave empty for auto detection based on in_folder\n", "\n", "karabo_id = 'SQS_AQS_CAM'\n", @@ -19,16 +19,16 @@ "out_filename = 'CORR-R{run:04d}-TPX01-S{sequence:05d}.h5'\n", "out_seq_len = 2000\n", "\n", - "max_num_centroids = 10000 # Maxinum number of centroids per train\n", + "max_num_centroids = 10000 # Maximum number of centroids per train\n", "chunks_centroids = [1, 5000] # Chunking of centroid data\n", "dataset_compression = 'gzip' # HDF compression method.\n", "dataset_compression_opts = 3 # HDF GZIP compression level.\n", "\n", "clustering_epsilon = 2 # centroiding: The maximum distance between two samples for one to be considered as in the neighborhood of the other\n", "clustering_tof_scale = 1e7 # centroiding: Scaling factor for the ToA axis so that the epsilon parameter in DB scan works in all 3 dimensions\n", - "clustering_min_samples = 2 # centroiding: minimum number of samples required for a cluster\n", + "clustering_min_samples = 2 # centroiding: minimum number of samples necessary for a cluster\n", "clustering_n_jobs = 1 # centroiding: (DBSCAN) The number of parallel jobs to run.\n", - "threshold_tot = 0 # raw data: minimum ToT required for a pixel to contain valid data\n", + "threshold_tot = 0 # raw data: minimum ToT necessary for a pixel to contain valid data\n", "\n", "raw_timewalk_lut_filepath = '' # fpath to look up table for timewalk correction relative to proposal path or empty string,\n", "centroiding_timewalk_lut_filepath = '' # fpath to look up table for timewalk correction relative to proposal path or empty string."