From b192e53f81f6d5b8cba7108016ca289ffb50f551 Mon Sep 17 00:00:00 2001
From: Philipp Schmidt <philipp.schmidt@xfel.eu>
Date: Mon, 18 Oct 2021 16:44:51 +0200
Subject: [PATCH] Fix no longer needed parameters, figure clears and markup
 wording

---
 notebooks/REMI/REMI_Digitize_and_Transform.ipynb | 7 +------
 1 file changed, 1 insertion(+), 6 deletions(-)

diff --git a/notebooks/REMI/REMI_Digitize_and_Transform.ipynb b/notebooks/REMI/REMI_Digitize_and_Transform.ipynb
index 7bd0701ad..1c78263ce 100644
--- a/notebooks/REMI/REMI_Digitize_and_Transform.ipynb
+++ b/notebooks/REMI/REMI_Digitize_and_Transform.ipynb
@@ -36,7 +36,6 @@
     "chunks_signals = [50, 50]  # HDF chunk size for signals.\n",
     "dataset_compression = 'gzip'  # HDF compression method.\n",
     "dataset_compression_opts = 3  # HDF GZIP compression level.\n",
-    "extra_sources = ['']  # No longer used.\n",
     "\n",
     "# Parallelization parameters.\n",
     "mp_pulse_info = 8  # Parallelization for pulse statistics.\n",
@@ -476,8 +475,6 @@
     "    edges = edges_by_det[det_name]\n",
     "    \n",
     "    fig = plt.figure(num=100+i, figsize=(9.5, 8))\n",
-    "    fig.clf()\n",
-    "    \n",
     "    grid = fig.add_gridspec(ncols=2, nrows=4, left=0.1, right=0.98, top=0.98, bottom=0.1)\n",
     "\n",
     "    fig.text(0.02, 0.98, det_name.upper(), rotation=90, ha='left', va='top', size='x-large')\n",
@@ -535,7 +532,6 @@
    "source": [
     "for i, det_name in enumerate(remi['detector'].keys()):\n",
     "    fig = plt.figure(num=20+i, figsize=(9.5, 6))\n",
-    "    fig.clf()\n",
     "    \n",
     "    edges = edges_by_det[det_name]\n",
     "    \n",
@@ -745,7 +741,7 @@
     "| 19 | `2+1+0 +0` `2+0+1 +0` `1+2+0 +0` `1+0+2 +0` `0+1+2 +0` `0+2+1 +0` (12 permutations) |\n",
     "\n",
     "* For hits reconstructed with method `> 10`, extra attention should be given to ensure they add meaningful signal.\n",
-    "* Any method `> 14` has to considered risky, because no time sum can be checked nor the position check be used. If the scale factors and/or `w` shift are not correct, then the number of events reconstructed with the risky methods will increase. They will most likely be *ghost hits*, which do not correspond to actual impacts on the detector."
+    "* Any method `> 14` has to considered risky, because neither a time sum nor the position can be checked. If the scale factors and/or `w` shift are not correct, then the number of events reconstructed with the risky methods will increase. They will most likely be *ghost hits*, which do not correspond to actual impacts on the detector."
    ]
   },
   {
@@ -837,7 +833,6 @@
     "    flat_hits = flat_hits[flat_hits['m'] < 10]\n",
     "\n",
     "    fig = plt.figure(num=70+i, figsize=(9, 13.5))\n",
-    "    fig.clf()\n",
     "    \n",
     "    fig.text(0.02, 0.98, det_name.upper(), rotation=90, ha='left', va='top', size='x-large')\n",
     "    fig.text(0.02, 0.02, det_name.upper(), rotation=90, ha='left', va='bottom', size='x-large')\n",
-- 
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