From cb5420d9839a65c5f14b6ffcc534f35981df83ff Mon Sep 17 00:00:00 2001
From: karnem <mikhail.karnevskiy@xfel.eu>
Date: Thu, 19 Mar 2020 16:31:13 +0100
Subject: [PATCH] Save command line to execute xfel_calibrate
---
xfel_calibrate/calibrate.py | 15 +++++++++++++++
1 file changed, 15 insertions(+)
diff --git a/xfel_calibrate/calibrate.py b/xfel_calibrate/calibrate.py
index 353d2d8d1..ebfae9931 100755
--- a/xfel_calibrate/calibrate.py
+++ b/xfel_calibrate/calibrate.py
@@ -543,6 +543,20 @@ def create_finalize_script(fmt_args, temp_path, job_list):
os.chmod(f_name, all_stats)
+def save_executed_command(run_tmp_path, version):
+ """
+ Create a file with string used to execute `xfel_calibrate`
+
+ :param run_tmp_path: path to temporary directory for running job outputs
+ :parm version: git version of the pycalibration package
+ """
+
+ f_name = "{}/run_calibrate.sh".format(run_tmp_path)
+ with open(f_name, "w") as finfile:
+ finfile.write(f'# pycalibration version: {version}\n')
+ finfile.write(' '.join(sys.argv))
+
+
def get_launcher_command(args, temp_path, dependent, job_list):
"""
Return a slurm launcher command
@@ -826,6 +840,7 @@ def run():
# Write all input parameters to rst file to be included to final report
parms = parameter_values(parms, **args)
make_par_table(parms, temp_path, run_uuid)
+ save_executed_command(run_tmp_path, version)
# wait on all jobs to run and then finalize the run by creating a report from the notebooks
out_path = "{}/{}/{}/{}".format(report_path, detector.upper(),
--
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