From f2e927e40121aeca27219aeb4d3c32fabcb77b19 Mon Sep 17 00:00:00 2001
From: karnem <mikhail.karnevskiy@desy.de>
Date: Fri, 6 Mar 2020 14:22:50 +0100
Subject: [PATCH] Edit concurency parameters from the commend line
---
xfel_calibrate/calibrate.py | 10 +++++++++-
1 file changed, 9 insertions(+), 1 deletion(-)
diff --git a/xfel_calibrate/calibrate.py b/xfel_calibrate/calibrate.py
index 9f77be0a9..353d2d8d1 100755
--- a/xfel_calibrate/calibrate.py
+++ b/xfel_calibrate/calibrate.py
@@ -56,6 +56,10 @@ def make_initial_parser():
help='Filename (and optionally path) for output'
' report')
+ parser.add_argument('--concurrency-par', type=str,
+ help='Name of cuncurrency parameter.'
+ 'If not given, it is taken from configuration.')
+
parser.add_argument('--priority', type=int, default=2,
help="Priority of batch jobs. If priority<=1, reserved"
" nodes become available.")
@@ -755,6 +759,10 @@ def run():
except KeyError:
print("Not one of the known calibrations or detectors")
return
+
+ if args["concurrency_par"] is not None:
+ concurrency["parameter"] = args["concurrency_par"]
+
with open(notebook, "r") as f:
nb = nbformat.read(f, as_version=4)
@@ -798,7 +806,7 @@ def run():
run_uuid = uuid4()
- # check that a modules field is present if we run concurrently
+ # check if concurrency parameter is given and we run concurrently
if not has_parm(parms, concurrency["parameter"]) and concurrency["parameter"] is not None:
msg = "Notebook cannot be run concurrently: no {} parameter".format(
concurrency["parameter"])
--
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