diff --git a/notebooks/LPD/LPDChar_Darks_NBC.ipynb b/notebooks/LPD/LPDChar_Darks_NBC.ipynb index 819065b38658ae829d80b800a9c6089b461e2f21..8f793f13bf319d7d5ed59f78c92f1ed489b2afae 100644 --- a/notebooks/LPD/LPDChar_Darks_NBC.ipynb +++ b/notebooks/LPD/LPDChar_Darks_NBC.ipynb @@ -52,21 +52,19 @@ { "cell_type": "code", "execution_count": null, - "metadata": { - "collapsed": true - }, + "metadata": {}, "outputs": [], "source": [ "cluster_profile = \"noDB\" # The ipcluster profile to use\n", - "in_folder = \"/gpfs/exfel/exp/FXE/201930/p900063/raw\" # path to input data, required\n", + "in_folder = \"/gpfs/exfel/exp/FXE/201931/p900088/raw\" # path to input data, required\n", "out_folder = \"/gpfs/exfel/data/scratch/karnem/LPD/\" # path to output to, required\n", "sequences = [0] # sequence files to evaluate\n", "modules = [-1] # list of modules to evaluate, RANGE ALLOWED\n", "\n", "capacitor_setting = 5 # capacitor_setting for which data was taken, required\n", - "run_high = 358 # run number in which high gain data was recorded, required\n", - "run_med = 359 # run number in which medium gain data was recorded, required\n", - "run_low = 360 # run number in which low gain data was recorded, required\n", + "run_high = 112 # run number in which high gain data was recorded, required\n", + "run_med = 113 # run number in which medium gain data was recorded, required\n", + "run_low = 114 # run number in which low gain data was recorded, required\n", "\n", "mem_cells = 512 # number of memory cells used\n", "local_output = True # output constants locally\n", @@ -120,7 +118,8 @@ "from cal_tools.tools import (gain_map_files, parse_runs, \n", " run_prop_seq_from_path, \n", " get_notebook_name, \n", - " get_dir_creation_date, get_from_db)\n", + " get_dir_creation_date, get_from_db,\n", + " get_random_db_interface)\n", "from cal_tools.influx import InfluxLogger\n", "from cal_tools.enums import BadPixels\n", "from cal_tools.plotting import (show_overview, plot_badpix_3d, \n", @@ -130,9 +129,7 @@ { "cell_type": "code", "execution_count": null, - "metadata": { - "collapsed": true - }, + "metadata": {}, "outputs": [], "source": [ "client = Client(profile=cluster_profile)\n", @@ -333,13 +330,13 @@ " (offset.shape[0], offset.shape[1], offset.shape[2], 3))\n", " noise_g[cap][qm] = np.zeros_like(offset_g[cap][qm])\n", " badpix_g[cap][qm] = np.zeros_like(offset_g[cap][qm])\n", - " data_g[cap][qm] = np.zeros((data.shape[0], 3))\n", + " data_g[cap][qm] = np.zeros((ntrains, 3))\n", " ntest_g[cap][qm] = np.zeros_like(offset_g[cap][qm])\n", "\n", " offset_g[cap][qm][..., gg] = offset\n", " noise_g[cap][qm][..., gg] = noise\n", " badpix_g[cap][qm][..., gg] = bp\n", - " data_g[cap][qm][..., gg] = data\n", + " data_g[cap][qm][:data.shape[0], gg] = data\n", " ntest_g[cap][qm][..., gg] = normal\n", "\n", " hn, cn = np.histogram(data, bins=20)\n", diff --git a/notebooks/LPD/LPDChar_Darks_Summary_NBC.ipynb b/notebooks/LPD/LPDChar_Darks_Summary_NBC.ipynb index 2f1044a4201c8021f914d0921d9363287133a43b..cb30454e34b6b65d67573cbebb728192e8a72fdc 100644 --- a/notebooks/LPD/LPDChar_Darks_Summary_NBC.ipynb +++ b/notebooks/LPD/LPDChar_Darks_Summary_NBC.ipynb @@ -10,9 +10,7 @@ { "cell_type": "code", "execution_count": null, - "metadata": { - "collapsed": true - }, + "metadata": {}, "outputs": [], "source": [ "cluster_profile = \"noDB\" # The ipcluster profile to use\n",