#!/bin/bash # set paths to use nb_path=$1 python_path=$2 ipython_path=$3 jupyter_path=$4 ipcluster_path=$5 krb_activate_path=$6 uuid=$7 notebook=$8 detector=$9 caltype=${10} final=${11} finalize=${12} echo "Running with the following parameters:" echo "Notebook path: $nb_path" echo "Python path: $python_path" echo "IPython path: $ipython_path" echo "Jupyter path: $jupyter_path" echo "IP-Cluster path: $ipcluster_path" echo "Karabo activate: $krb_activate_path" echo "IP-Cluster profile: $uuid" export CAL_NOTEBOOK_NAME=$notebook echo "Starting influx feeder" ./cal_influx_feeder.sh $notebook $detector $caltype > /dev/null 2>&1 & # activate karabo if requested if [ "${krb_activate_path}" != "NO_KRB_ACTIVATE" ] then source ${krb_activate_path} fi # make sure we use agg backend export MPLBACKEND=AGG # start an ip cluster if requested if [ "${uuid}" != "NO_CLUSTER" ] then ${ipython_path} profile create ${uuid} --parallel ${ipcluster_path} start --n=16 --profile=${uuid} --daemon & sleep 15 fi echo "Running script" ${jupyter_path} nbconvert --to rst --ExecutePreprocessor.timeout=36000 --ExecutePreprocessor.allow_errors=True --TemplateExporter.exclude_input=True --execute ${nb_path} # stop the cluster if requested if [ "${uuid}" != "NO_CLUSTER" ] then ${ipcluster_path} stop --profile=${uuid} profile_path=`${ipython_path} locate profile ${uuid}` echo "Removing cluster profile from: $profile_path" rm -rf $profile_path fi if [ "${final}" == "FINAL" ] then ${finalize} fi killall -9 cal_influx_feeder.sh