From e5f4504d6c3b182cf09ac056acc694e8da8ff263 Mon Sep 17 00:00:00 2001
From: Valerio Mariani <valerio.mariani@desy.de>
Date: Fri, 16 Mar 2018 11:35:00 +0100
Subject: [PATCH] Update documentation
---
.../cfelpyutils.crystfel_utils.doctree | Bin 8612 -> 8389 bytes
doc/build/doctrees/cfelpyutils.doctree | Bin 5731 -> 5562 bytes
.../cfelpyutils.geometry_utils.doctree | Bin 32048 -> 31035 bytes
.../cfelpyutils.parameter_utils.doctree | Bin 12768 -> 13314 bytes
doc/build/doctrees/environment.pickle | Bin 10409 -> 9561 bytes
doc/build/doctrees/index.doctree | Bin 4923 -> 4856 bytes
doc/build/doctrees/modules.doctree | Bin 2597 -> 2552 bytes
doc/build/html/.buildinfo | 2 +-
doc/build/html/_static/basic.css | 7 -
.../html/cfelpyutils.crystfel_utils.html | 26 +--
.../html/cfelpyutils.geometry_utils.html | 149 +++++++++---------
doc/build/html/cfelpyutils.html | 9 +-
.../html/cfelpyutils.parameter_utils.html | 49 +++---
doc/build/html/genindex.html | 45 +-----
doc/build/html/index.html | 13 +-
doc/build/html/modules.html | 9 +-
doc/build/html/objects.inv | Bin 504 -> 464 bytes
doc/build/html/py-modindex.html | 9 +-
doc/build/html/search.html | 9 +-
doc/build/html/searchindex.js | 2 +-
20 files changed, 157 insertions(+), 172 deletions(-)
diff --git a/doc/build/doctrees/cfelpyutils.crystfel_utils.doctree b/doc/build/doctrees/cfelpyutils.crystfel_utils.doctree
index 1fda736dd872107a04ddb6ddaa4cbaee57638274..880d0b728247eb60ad19b2503cd50f4080d81639 100644
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diff --git a/doc/build/doctrees/cfelpyutils.parameter_utils.doctree b/doc/build/doctrees/cfelpyutils.parameter_utils.doctree
index 75cb037dd9a936690b94971e078198f7f686a3ff..af2b18f621844b418c465883b7b1b2e34ffae71b 100644
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diff --git a/doc/build/doctrees/environment.pickle b/doc/build/doctrees/environment.pickle
index 5c034ea296cb14001b0aecdcf59b9d851194f636..22427ebdc4b23a4c7524305b28ecde4af83d6a14 100644
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diff --git a/doc/build/html/.buildinfo b/doc/build/html/.buildinfo
index 84b02ee..ff6c4f2 100644
--- a/doc/build/html/.buildinfo
+++ b/doc/build/html/.buildinfo
@@ -1,4 +1,4 @@
# Sphinx build info version 1
# This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done.
-config: b3b7939111dbbf905db0123cb645320e
+config: d40e958a7d3fc689b5ae78674cab31f2
tags: 645f666f9bcd5a90fca523b33c5a78b7
diff --git a/doc/build/html/_static/basic.css b/doc/build/html/_static/basic.css
index 6df76b0..dc88b5a 100644
--- a/doc/build/html/_static/basic.css
+++ b/doc/build/html/_static/basic.css
@@ -398,13 +398,6 @@ table.field-list td, table.field-list th {
margin: 0;
}
-.field-name {
- -moz-hyphens: manual;
- -ms-hyphens: manual;
- -webkit-hyphens: manual;
- hyphens: manual;
-}
-
/* -- other body styles ----------------------------------------------------- */
ol.arabic {
diff --git a/doc/build/html/cfelpyutils.crystfel_utils.html b/doc/build/html/cfelpyutils.crystfel_utils.html
index 38cf1ba..fb516cd 100644
--- a/doc/build/html/cfelpyutils.crystfel_utils.html
+++ b/doc/build/html/cfelpyutils.crystfel_utils.html
@@ -1,13 +1,16 @@
-
<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
"http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
+
<html xmlns="http://www.w3.org/1999/xhtml">
<head>
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
+
<title>cfelpyutils.crystfel_utils module — cfelpyutils 0.5 documentation</title>
+
<link rel="stylesheet" href="_static/sphinxdoc.css" type="text/css" />
<link rel="stylesheet" href="_static/pygments.css" type="text/css" />
+
<script type="text/javascript">
var DOCUMENTATION_OPTIONS = {
URL_ROOT: './',
@@ -24,7 +27,7 @@
<link rel="index" title="Index" href="genindex.html" />
<link rel="search" title="Search" href="search.html" />
</head>
- <body>
+ <body role="document">
<div class="related" role="navigation" aria-label="related navigation">
<h3>Navigation</h3>
<ul>
@@ -74,22 +77,23 @@ get_detector_geometry_2 function from CrystFEL.</p>
<dt id="cfelpyutils.crystfel_utils.load_crystfel_geometry">
<code class="descclassname">cfelpyutils.crystfel_utils.</code><code class="descname">load_crystfel_geometry</code><span class="sig-paren">(</span><em>filename</em><span class="sig-paren">)</span><a class="headerlink" href="#cfelpyutils.crystfel_utils.load_crystfel_geometry" title="Permalink to this definition">¶</a></dt>
<dd><p>Load a CrystFEL geometry file into a dictionary.</p>
-<p>Reimplementation of the get_detector_geometry_2 function from CrystFEL
-in python. Return a dictionary with the geometry information read from
-the file. Convert entries in the geometry file to keys in the
-returned dictionary. For a full documentation on the CrystFEL geometry
-format, see:</p>
+<p>Reimplementation of the get_detector_geometry_2 function from
+CrystFEL in python. Return a dictionary with the geometry
+information read from the file. Convert entries in the geometry
+file to keys in the returned dictionary. For a full documentation
+on the CrystFEL geometry format, see:</p>
<p><a class="reference external" href="http://www.desy.de/~twhite/crystfel/manual-crystfel_geometry.html">http://www.desy.de/~twhite/crystfel/manual-crystfel_geometry.html</a></p>
<p>The code of this function is synced with the code of the function
-‘get_detector_geometry_2’ in CrystFEL at commit
+‘get_detector_geometry_2’ in CrystFEL at commit
41a8fa9819010fe8ddeb66676fee717f5226c7b8.</p>
<table class="docutils field-list" frame="void" rules="none">
<col class="field-name" />
<col class="field-body" />
<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><strong>filename</strong> (<em>str</em>) – filename of the geometry file.</td>
+<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><strong>filename</strong> (<em>str</em>) – filename of the geometry file.</td>
</tr>
-<tr class="field-even field"><th class="field-name">Returns:</th><td class="field-body">dictionary with the geometry information loaded from the file.</td>
+<tr class="field-even field"><th class="field-name">Returns:</th><td class="field-body">dictionary with the geometry information loaded from the
+file.</td>
</tr>
<tr class="field-odd field"><th class="field-name">Return type:</th><td class="field-body">dict</td>
</tr>
@@ -119,7 +123,7 @@ format, see:</p>
</div>
<div class="footer" role="contentinfo">
© Copyright 2016, CFEL Team.
- Created using <a href="http://sphinx-doc.org/">Sphinx</a> 1.6.3.
+ Created using <a href="http://sphinx-doc.org/">Sphinx</a> 1.5.6.
</div>
</body>
</html>
\ No newline at end of file
diff --git a/doc/build/html/cfelpyutils.geometry_utils.html b/doc/build/html/cfelpyutils.geometry_utils.html
index da24f3a..d95cf85 100644
--- a/doc/build/html/cfelpyutils.geometry_utils.html
+++ b/doc/build/html/cfelpyutils.geometry_utils.html
@@ -1,13 +1,16 @@
-
<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
"http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
+
<html xmlns="http://www.w3.org/1999/xhtml">
<head>
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
+
<title>cfelpyutils.geometry_utils module — cfelpyutils 0.5 documentation</title>
+
<link rel="stylesheet" href="_static/sphinxdoc.css" type="text/css" />
<link rel="stylesheet" href="_static/pygments.css" type="text/css" />
+
<script type="text/javascript">
var DOCUMENTATION_OPTIONS = {
URL_ROOT: './',
@@ -24,7 +27,7 @@
<link rel="index" title="Index" href="genindex.html" />
<link rel="search" title="Search" href="search.html" />
</head>
- <body>
+ <body role="document">
<div class="related" role="navigation" aria-label="related navigation">
<h3>Navigation</h3>
<ul>
@@ -67,59 +70,38 @@
<div class="section" id="module-cfelpyutils.geometry_utils">
<span id="cfelpyutils-geometry-utils-module"></span><h1>cfelpyutils.geometry_utils module<a class="headerlink" href="#module-cfelpyutils.geometry_utils" title="Permalink to this headline">¶</a></h1>
<p>Geometry utilities.</p>
-<p>Functions that load, manipulate and apply geometry information to detector
-pixel data.</p>
-<dl class="class">
-<dt id="cfelpyutils.geometry_utils.PixelMaps">
-<em class="property">class </em><code class="descclassname">cfelpyutils.geometry_utils.</code><code class="descname">PixelMaps</code><span class="sig-paren">(</span><em>x</em>, <em>y</em>, <em>r</em><span class="sig-paren">)</span><a class="headerlink" href="#cfelpyutils.geometry_utils.PixelMaps" title="Permalink to this definition">¶</a></dt>
-<dd><p>Bases: <code class="xref py py-class docutils literal"><span class="pre">tuple</span></code></p>
-<p>A namedtuple used for pixel maps objects.</p>
-<p>Pixel maps are arrays of the same shape of the data whose geometry they
-describe. Each cell in the array holds the coordinate, in the reference system
-of the physical detector, of the corresponding pixel in the data array.</p>
-<p>The first two fields store the pixel maps for the x coordinate
-and the y coordinate respectively. The third field is instead a pixel map
-storing the distance of each pixel in the data array from the center of the
-reference system.</p>
-<dl class="attribute">
-<dt id="cfelpyutils.geometry_utils.PixelMaps.r">
-<code class="descname">r</code><a class="headerlink" href="#cfelpyutils.geometry_utils.PixelMaps.r" title="Permalink to this definition">¶</a></dt>
-<dd><p>Alias for field number 2</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="cfelpyutils.geometry_utils.PixelMaps.x">
-<code class="descname">x</code><a class="headerlink" href="#cfelpyutils.geometry_utils.PixelMaps.x" title="Permalink to this definition">¶</a></dt>
-<dd><p>Alias for field number 0</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="cfelpyutils.geometry_utils.PixelMaps.y">
-<code class="descname">y</code><a class="headerlink" href="#cfelpyutils.geometry_utils.PixelMaps.y" title="Permalink to this definition">¶</a></dt>
-<dd><p>Alias for field number 1</p>
-</dd></dl>
-
-</dd></dl>
-
+<p>Functions that load, manipulate and apply geometry information to
+detector pixel data.</p>
<dl class="function">
<dt id="cfelpyutils.geometry_utils.adjust_pixel_maps_for_pyqtgraph">
<code class="descclassname">cfelpyutils.geometry_utils.</code><code class="descname">adjust_pixel_maps_for_pyqtgraph</code><span class="sig-paren">(</span><em>pixel_maps</em><span class="sig-paren">)</span><a class="headerlink" href="#cfelpyutils.geometry_utils.adjust_pixel_maps_for_pyqtgraph" title="Permalink to this definition">¶</a></dt>
-<dd><p>Adjust pixel maps for visualization of the data in a pyqtgraph widget.</p>
-<p>The adjusted maps can be used for a Pyqtgraph ImageView widget.
-Essentially, the origin of the reference system is moved to the
-top-left of the image.</p>
+<dd><p>Adjust pixel maps for visualization of the data in a pyqtgraph
+widget.</p>
+<p>The adjusted maps can be used for a Pyqtgraph ImageView widget.</p>
<table class="docutils field-list" frame="void" rules="none">
<col class="field-name" />
<col class="field-body" />
<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><strong>pixel_maps</strong> (<a class="reference internal" href="#cfelpyutils.geometry_utils.PixelMaps" title="cfelpyutils.geometry_utils.PixelMaps"><em>PixelMaps</em></a>) – pixel maps, as returned by the
-<a class="reference internal" href="#cfelpyutils.geometry_utils.compute_pixel_maps" title="cfelpyutils.geometry_utils.compute_pixel_maps"><code class="xref py py-obj docutils literal"><span class="pre">compute_pixel_maps</span></code></a> function in this module.</td>
-</tr>
-<tr class="field-even field"><th class="field-name">Returns:</th><td class="field-body">a PixelMaps tuple containing the ajusted pixel maps for
-the x and y coordinates in the first two fields, and the
-value None in the third.</td>
+<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><ul class="first simple">
+<li><strong>ndarray</strong><strong>, </strong><strong>ndarray</strong><strong>]</strong> (<em>Tuple</em><em>[</em><em>ndarray</em><em>,</em>) – a named tuple containing the</li>
+<li><strong>maps. The first two fields</strong><strong>, </strong><strong>"x" and "y"</strong><strong>, </strong><strong>should store the</strong> (<em>pixel</em>) – </li>
+<li><strong>maps for the x coordinateand the y coordinate. The third</strong><strong>,</strong> (<em>pixel</em>) – </li>
+<li><strong>should instead store the distance of each pixel in the</strong> (<em>"r"</em><em>,</em>) – </li>
+<li><strong>array from the center of the reference system.</strong> (<em>data</em>) – </li>
+</ul>
+</td>
</tr>
-<tr class="field-odd field"><th class="field-name">Return type:</th><td class="field-body"><a class="reference internal" href="#cfelpyutils.geometry_utils.PixelMaps" title="cfelpyutils.geometry_utils.PixelMaps">PixelMaps</a></td>
+<tr class="field-even field"><th class="field-name">Returns:</th><td class="field-body"><p class="first last"><dl class="docutils">
+<dt>Tuple[ndarray, ndarray] A tuple containing the pixel</dt>
+<dd><p class="first last">maps. The first two fields, named “x” and “y” respectively,
+store the pixel maps for the x coordinate and the y
+coordinate. The third field, named “r”, is instead a pixel
+map storing the distance of each pixel in the data array
+from the center of the reference system.</p>
+</dd>
+</dl>
+</p>
+</td>
</tr>
</tbody>
</table>
@@ -136,22 +118,22 @@ containing a representation of the physical layout of the detector.</p>
<col class="field-body" />
<tbody valign="top">
<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><ul class="first simple">
-<li><strong>data</strong> (<em>ndarray</em>) – array containing the data on which the geometry
+<li><strong>data</strong> (<em>ndarray</em>) – array containing the data on which the geometry
will be applied.</li>
-<li><strong>pixel_maps</strong> (<a class="reference internal" href="#cfelpyutils.geometry_utils.PixelMaps" title="cfelpyutils.geometry_utils.PixelMaps"><em>PixelMaps</em></a>) – a pixelmap tuple, as returned by the
+<li><strong>pixel_maps</strong> (<em>PixelMaps</em>) – a pixelmap tuple, as returned by the
<a class="reference internal" href="#cfelpyutils.geometry_utils.compute_pixel_maps" title="cfelpyutils.geometry_utils.compute_pixel_maps"><code class="xref py py-obj docutils literal"><span class="pre">compute_pixel_maps</span></code></a> function in this module.</li>
-<li><strong>output_array</strong> (<em>Optional</em><em>[</em><em>ndarray</em><em>]</em>) – a preallocated array (of dtype
-numpy.float32) to store the function output. If provided, this
-array will be filled by the function and returned to the user.
-If not provided, the function will create a new array
-automatically and return it to the user. Defaults to None
-(No array provided).</li>
+<li><strong>output_array</strong> (<em>Optional</em><em>[</em><em>ndarray</em><em>]</em>) – a preallocated array (of
+dtype numpy.float32) to store the function output. If
+provided, this array will be filled by the function and
+and returned to the user. If not provided, the function
+will create a new array automatically and return it to the
+user. Defaults to None (No array provided).</li>
</ul>
</td>
</tr>
-<tr class="field-even field"><th class="field-name">Returns:</th><td class="field-body"><p class="first">a numpy.float32 array containing the geometry information
-applied to the input data (i.e.: a physical representation of the
-layout of the detector).</p>
+<tr class="field-even field"><th class="field-name">Returns:</th><td class="field-body"><p class="first">a numpy.float32 array containing the geometry
+information applied to the input data (i.e.: a representation
+of the physical layout of the detector).</p>
</td>
</tr>
<tr class="field-odd field"><th class="field-name">Return type:</th><td class="field-body"><p class="first last">ndarray</p>
@@ -164,23 +146,30 @@ layout of the detector).</p>
<dl class="function">
<dt id="cfelpyutils.geometry_utils.compute_minimum_array_size">
<code class="descclassname">cfelpyutils.geometry_utils.</code><code class="descname">compute_minimum_array_size</code><span class="sig-paren">(</span><em>pixel_maps</em><span class="sig-paren">)</span><a class="headerlink" href="#cfelpyutils.geometry_utils.compute_minimum_array_size" title="Permalink to this definition">¶</a></dt>
-<dd><p>Compute the minimum size of an array that can store the applied geometry.</p>
-<p>Return the minimum size of an array that can store data on which the
-geometry information described by the pixel maps has been applied.</p>
-<p>The returned array shape is big enough to display all the input pixel
-values in the reference system of the physical detector. The array is
-supposed to be centered at the center of the reference system of the
-detector (i.e: the beam interaction point).</p>
+<dd><p>Compute the minimum size of an array that can store the applied
+geometry.</p>
+<p>Return the minimum size of an array that can store data on which
+the geometry information described by the pixel maps has been
+applied.</p>
+<p>The returned array shape is big enough to display all the input
+pixel values in the reference system of the physical detector. The
+array is supposed to be centered at the center of the reference
+system of the detector (i.e: the beam interaction point).</p>
<table class="docutils field-list" frame="void" rules="none">
<col class="field-name" />
<col class="field-body" />
<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><strong>pixel_maps</strong> (<a class="reference internal" href="#cfelpyutils.geometry_utils.PixelMaps" title="cfelpyutils.geometry_utils.PixelMaps"><em>PixelMaps</em></a>) – a PixelMaps tuple, as returned by the
-<a class="reference internal" href="#cfelpyutils.geometry_utils.compute_pixel_maps" title="cfelpyutils.geometry_utils.compute_pixel_maps"><code class="xref py py-obj docutils literal"><span class="pre">compute_pixel_maps</span></code></a> function in this module.</td>
+<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><strong>ndarray</strong><strong>, </strong><strong>ndarray</strong><strong>]</strong> (<em>Tuple</em><em>[</em><em>ndarray</em><em>,</em>) – a named tuple containing the
+pixel maps. The first two fields, “x” and “y”, should store
+the pixel maps for the x coordinateand the y coordinate.
+The third, “r”, should instead store the distance of each
+pixel in the data array from the center of the reference
+system.</td>
</tr>
-<tr class="field-even field"><th class="field-name">Returns:</th><td class="field-body">numpy shape-like tuple storing the minimum array size.</td>
+<tr class="field-even field"><th class="field-name">Returns:</th><td class="field-body">a numpy-style shape tuple storing the minimum
+array size.</td>
</tr>
-<tr class="field-odd field"><th class="field-name">Return type:</th><td class="field-body">tuple</td>
+<tr class="field-odd field"><th class="field-name">Return type:</th><td class="field-body">Tuple[int, int]</td>
</tr>
</tbody>
</table>
@@ -192,20 +181,24 @@ detector (i.e: the beam interaction point).</p>
<dd><p>Compute pixel maps from a CrystFEL geometry object.</p>
<p>Take as input a CrystFEL-style geometry object (A dictionary
returned by the function load_crystfel_geometry function in the
-crystfel_utils module) and return a PixelMap tuple . The origin
-the reference system used by the pixel maps is set at the beam interaction
-point.</p>
+crystfel_utils module) and return a PixelMap tuple . The origin the
+reference system used by the pixel maps is set at the beam
+interaction point.</p>
<table class="docutils field-list" frame="void" rules="none">
<col class="field-name" />
<col class="field-body" />
<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><strong>geometry</strong> (<em>dict</em>) – A CrystFEL geometry object (A dictionary returned by
-the <a class="reference internal" href="cfelpyutils.crystfel_utils.html#cfelpyutils.crystfel_utils.load_crystfel_geometry" title="cfelpyutils.crystfel_utils.load_crystfel_geometry"><code class="xref py py-obj docutils literal"><span class="pre">cfelpyutils.crystfel_utils.load_crystfel_geometry</span></code></a>
+<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><strong>geometry</strong> (<em>dict</em>) – A CrystFEL geometry object (A dictionary
+returned by the
+<a class="reference internal" href="cfelpyutils.crystfel_utils.html#cfelpyutils.crystfel_utils.load_crystfel_geometry" title="cfelpyutils.crystfel_utils.load_crystfel_geometry"><code class="xref py py-obj docutils literal"><span class="pre">cfelpyutils.crystfel_utils.load_crystfel_geometry</span></code></a>
function).</td>
</tr>
-<tr class="field-even field"><th class="field-name">Returns:</th><td class="field-body">a PixelMaps tuple.</td>
-</tr>
-<tr class="field-odd field"><th class="field-name">Return type:</th><td class="field-body"><a class="reference internal" href="#cfelpyutils.geometry_utils.PixelMaps" title="cfelpyutils.geometry_utils.PixelMaps">PixelMaps</a></td>
+<tr class="field-even field"><th class="field-name">Returns:</th><td class="field-body">Tuple[ndarray, ndarray, ndarray] A tuple containing the pixel
+maps. The first two fields, named “x” and “y” respectively,
+store the pixel maps for the x coordinate and the y coordinate.
+The third field, named “r”, is instead a pixel map storing the
+distance of each pixel in the data array from the center of the
+reference system.</td>
</tr>
</tbody>
</table>
@@ -233,7 +226,7 @@ function).</td>
</div>
<div class="footer" role="contentinfo">
© Copyright 2016, CFEL Team.
- Created using <a href="http://sphinx-doc.org/">Sphinx</a> 1.6.3.
+ Created using <a href="http://sphinx-doc.org/">Sphinx</a> 1.5.6.
</div>
</body>
</html>
\ No newline at end of file
diff --git a/doc/build/html/cfelpyutils.html b/doc/build/html/cfelpyutils.html
index 0ffa52b..bb9c7a1 100644
--- a/doc/build/html/cfelpyutils.html
+++ b/doc/build/html/cfelpyutils.html
@@ -1,13 +1,16 @@
-
<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
"http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
+
<html xmlns="http://www.w3.org/1999/xhtml">
<head>
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
+
<title>cfelpyutils package — cfelpyutils 0.5 documentation</title>
+
<link rel="stylesheet" href="_static/sphinxdoc.css" type="text/css" />
<link rel="stylesheet" href="_static/pygments.css" type="text/css" />
+
<script type="text/javascript">
var DOCUMENTATION_OPTIONS = {
URL_ROOT: './',
@@ -24,7 +27,7 @@
<link rel="index" title="Index" href="genindex.html" />
<link rel="search" title="Search" href="search.html" />
</head>
- <body>
+ <body role="document">
<div class="related" role="navigation" aria-label="related navigation">
<h3>Navigation</h3>
<ul>
@@ -119,7 +122,7 @@ python to work with several file format used in x-ray imaging).</p>
</div>
<div class="footer" role="contentinfo">
© Copyright 2016, CFEL Team.
- Created using <a href="http://sphinx-doc.org/">Sphinx</a> 1.6.3.
+ Created using <a href="http://sphinx-doc.org/">Sphinx</a> 1.5.6.
</div>
</body>
</html>
\ No newline at end of file
diff --git a/doc/build/html/cfelpyutils.parameter_utils.html b/doc/build/html/cfelpyutils.parameter_utils.html
index bff0b82..b674668 100644
--- a/doc/build/html/cfelpyutils.parameter_utils.html
+++ b/doc/build/html/cfelpyutils.parameter_utils.html
@@ -1,13 +1,16 @@
-
<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
"http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
+
<html xmlns="http://www.w3.org/1999/xhtml">
<head>
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
+
<title>cfelpyutils.parameter_utils module — cfelpyutils 0.5 documentation</title>
+
<link rel="stylesheet" href="_static/sphinxdoc.css" type="text/css" />
<link rel="stylesheet" href="_static/pygments.css" type="text/css" />
+
<script type="text/javascript">
var DOCUMENTATION_OPTIONS = {
URL_ROOT: './',
@@ -24,7 +27,7 @@
<link rel="index" title="Index" href="genindex.html" />
<link rel="search" title="Search" href="search.html" />
</head>
- <body>
+ <body role="document">
<div class="related" role="navigation" aria-label="related navigation">
<h3>Navigation</h3>
<ul>
@@ -71,24 +74,27 @@
<dt id="cfelpyutils.parameter_utils.convert_parameters">
<code class="descclassname">cfelpyutils.parameter_utils.</code><code class="descname">convert_parameters</code><span class="sig-paren">(</span><em>config_dict</em><span class="sig-paren">)</span><a class="headerlink" href="#cfelpyutils.parameter_utils.convert_parameters" title="Permalink to this definition">¶</a></dt>
<dd><p>Convert strings in parameter dictionaries to the corrent data type.</p>
-<p>Read a parameter dictionary returned by the ConfigParser python module,
-and convert each entry in an object of the corresponding type,
-without changing the structure of the dictionary.</p>
-<p>Try to convert each entry in the dictionary according to the following
-rules. The first rule that applies to the entry determines the type.</p>
+<p>Read a parameter dictionary returned by the ConfigParser python
+module, and convert each entry in an object of the corresponding
+type, without changing the structure of the dictionary.</p>
+<p>Try to convert each entry in the dictionary according to the
+following rules. The first rule that applies to the entry
+determines the type.</p>
<ul>
<li><p class="first">If the entry starts and ends with a single quote or double quote,
leave it as a string.</p>
</li>
-<li><p class="first">If the entry starts and ends with a square bracket, convert it to a list.</p>
+<li><p class="first">If the entry starts and ends with a square bracket, convert it to
+a list.</p>
</li>
<li><p class="first">If the entry starts and ends with a curly braces, convert it to a
dictionary or a set.</p>
</li>
-<li><p class="first">If the entry is the word None, without quotes, convert it to NoneType.</p>
+<li><p class="first">If the entry is the word None, without quotes, convert it to
+NoneType.</p>
</li>
-<li><p class="first">If the entry is the word False, without quotes, convert it to a boolean
-False.</p>
+<li><p class="first">If the entry is the word False, without quotes, convert it to a
+boolean False.</p>
</li>
<li><p class="first">If the entry is the word True, without quotes, convert it to a
boolean True.</p>
@@ -110,15 +116,22 @@ try to interpret the entry in order as:</p>
<col class="field-name" />
<col class="field-body" />
<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><strong>config</strong> (<em>dict</em>) – a dictionary containing strings (the dictionary
-returned by Config Parser).</td>
+<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><p class="first"><strong>config</strong> (<em>dict</em>) – a dictionary containing strings (the dictionary
+returned by Config Parser).</p>
+</td>
</tr>
-<tr class="field-even field"><th class="field-name">Returns:</th><td class="field-body">dictionary with the same structure as the input
-dictionary, but with correct types assigned to each entry.</td>
+<tr class="field-even field"><th class="field-name">Returns:</th><td class="field-body"><p class="first">dictionary with the same structure as the input
+dictionary, but with correct types assigned to each entry.</p>
+</td>
</tr>
-<tr class="field-odd field"><th class="field-name">Return type:</th><td class="field-body">dict</td>
+<tr class="field-odd field"><th class="field-name">Return type:</th><td class="field-body"><p class="first">dict</p>
+</td>
</tr>
-<tr class="field-even field"><th class="field-name">Raises:</th><td class="field-body"><code class="xref py py-exc docutils literal"><span class="pre">RuntimeError</span></code> – if an entry cannot be converted to any supported type.</td>
+<tr class="field-even field"><th class="field-name">Raises:</th><td class="field-body"><ul class="first last simple">
+<li><code class="xref py py-exc docutils literal"><span class="pre">RuntimeError</span></code> – if an entry cannot be converted to any supported</li>
+<li><code class="xref py py-exc docutils literal"><span class="pre">type.</span></code></li>
+</ul>
+</td>
</tr>
</tbody>
</table>
@@ -146,7 +159,7 @@ dictionary, but with correct types assigned to each entry.</td>
</div>
<div class="footer" role="contentinfo">
© Copyright 2016, CFEL Team.
- Created using <a href="http://sphinx-doc.org/">Sphinx</a> 1.6.3.
+ Created using <a href="http://sphinx-doc.org/">Sphinx</a> 1.5.6.
</div>
</body>
</html>
\ No newline at end of file
diff --git a/doc/build/html/genindex.html b/doc/build/html/genindex.html
index 402882f..8e3eaeb 100644
--- a/doc/build/html/genindex.html
+++ b/doc/build/html/genindex.html
@@ -1,14 +1,17 @@
-
<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
"http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
+
<html xmlns="http://www.w3.org/1999/xhtml">
<head>
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
+
<title>Index — cfelpyutils 0.5 documentation</title>
+
<link rel="stylesheet" href="_static/sphinxdoc.css" type="text/css" />
<link rel="stylesheet" href="_static/pygments.css" type="text/css" />
+
<script type="text/javascript">
var DOCUMENTATION_OPTIONS = {
URL_ROOT: './',
@@ -25,7 +28,7 @@
<link rel="index" title="Index" href="#" />
<link rel="search" title="Search" href="search.html" />
</head>
- <body>
+ <body role="document">
<div class="related" role="navigation" aria-label="related navigation">
<h3>Navigation</h3>
<ul>
@@ -68,10 +71,6 @@
<a href="#A"><strong>A</strong></a>
| <a href="#C"><strong>C</strong></a>
| <a href="#L"><strong>L</strong></a>
- | <a href="#P"><strong>P</strong></a>
- | <a href="#R"><strong>R</strong></a>
- | <a href="#X"><strong>X</strong></a>
- | <a href="#Y"><strong>Y</strong></a>
</div>
<h2 id="A">A</h2>
@@ -116,38 +115,6 @@
</ul></td>
</tr></table>
-<h2 id="P">P</h2>
-<table style="width: 100%" class="indextable genindextable"><tr>
- <td style="width: 33%; vertical-align: top;"><ul>
- <li><a href="cfelpyutils.geometry_utils.html#cfelpyutils.geometry_utils.PixelMaps">PixelMaps (class in cfelpyutils.geometry_utils)</a>
-</li>
- </ul></td>
-</tr></table>
-
-<h2 id="R">R</h2>
-<table style="width: 100%" class="indextable genindextable"><tr>
- <td style="width: 33%; vertical-align: top;"><ul>
- <li><a href="cfelpyutils.geometry_utils.html#cfelpyutils.geometry_utils.PixelMaps.r">r (cfelpyutils.geometry_utils.PixelMaps attribute)</a>
-</li>
- </ul></td>
-</tr></table>
-
-<h2 id="X">X</h2>
-<table style="width: 100%" class="indextable genindextable"><tr>
- <td style="width: 33%; vertical-align: top;"><ul>
- <li><a href="cfelpyutils.geometry_utils.html#cfelpyutils.geometry_utils.PixelMaps.x">x (cfelpyutils.geometry_utils.PixelMaps attribute)</a>
-</li>
- </ul></td>
-</tr></table>
-
-<h2 id="Y">Y</h2>
-<table style="width: 100%" class="indextable genindextable"><tr>
- <td style="width: 33%; vertical-align: top;"><ul>
- <li><a href="cfelpyutils.geometry_utils.html#cfelpyutils.geometry_utils.PixelMaps.y">y (cfelpyutils.geometry_utils.PixelMaps attribute)</a>
-</li>
- </ul></td>
-</tr></table>
-
</div>
@@ -169,7 +136,7 @@
</div>
<div class="footer" role="contentinfo">
© Copyright 2016, CFEL Team.
- Created using <a href="http://sphinx-doc.org/">Sphinx</a> 1.6.3.
+ Created using <a href="http://sphinx-doc.org/">Sphinx</a> 1.5.6.
</div>
</body>
</html>
\ No newline at end of file
diff --git a/doc/build/html/index.html b/doc/build/html/index.html
index 7f484cb..2114031 100644
--- a/doc/build/html/index.html
+++ b/doc/build/html/index.html
@@ -1,13 +1,16 @@
-
<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
"http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
+
<html xmlns="http://www.w3.org/1999/xhtml">
<head>
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
+
<title>Welcome to cfelpyutils’s documentation! — cfelpyutils 0.5 documentation</title>
+
<link rel="stylesheet" href="_static/sphinxdoc.css" type="text/css" />
<link rel="stylesheet" href="_static/pygments.css" type="text/css" />
+
<script type="text/javascript">
var DOCUMENTATION_OPTIONS = {
URL_ROOT: './',
@@ -24,7 +27,7 @@
<link rel="index" title="Index" href="genindex.html" />
<link rel="search" title="Search" href="search.html" />
</head>
- <body>
+ <body role="document">
<div class="related" role="navigation" aria-label="related navigation">
<h3>Navigation</h3>
<ul>
@@ -41,7 +44,7 @@
<div class="sphinxsidebarwrapper">
<h3><a href="#">Table Of Contents</a></h3>
<ul>
-<li><a class="reference internal" href="#">Welcome to cfelpyutils’s documentation!</a></li>
+<li><a class="reference internal" href="#">Welcome to cfelpyutils’s documentation!</a></li>
<li><a class="reference internal" href="#indices-and-tables">Indices and tables</a></li>
</ul>
@@ -71,7 +74,7 @@
<div class="body" role="main">
<div class="section" id="welcome-to-cfelpyutils-s-documentation">
-<h1>Welcome to cfelpyutils’s documentation!<a class="headerlink" href="#welcome-to-cfelpyutils-s-documentation" title="Permalink to this headline">¶</a></h1>
+<h1>Welcome to cfelpyutils’s documentation!<a class="headerlink" href="#welcome-to-cfelpyutils-s-documentation" title="Permalink to this headline">¶</a></h1>
<p>Contents:</p>
<div class="toctree-wrapper compound">
</div>
@@ -105,7 +108,7 @@
</div>
<div class="footer" role="contentinfo">
© Copyright 2016, CFEL Team.
- Created using <a href="http://sphinx-doc.org/">Sphinx</a> 1.6.3.
+ Created using <a href="http://sphinx-doc.org/">Sphinx</a> 1.5.6.
</div>
</body>
</html>
\ No newline at end of file
diff --git a/doc/build/html/modules.html b/doc/build/html/modules.html
index 4d9e51f..5562e7c 100644
--- a/doc/build/html/modules.html
+++ b/doc/build/html/modules.html
@@ -1,13 +1,16 @@
-
<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
"http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
+
<html xmlns="http://www.w3.org/1999/xhtml">
<head>
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
+
<title>cfelpyutils — cfelpyutils 0.5 documentation</title>
+
<link rel="stylesheet" href="_static/sphinxdoc.css" type="text/css" />
<link rel="stylesheet" href="_static/pygments.css" type="text/css" />
+
<script type="text/javascript">
var DOCUMENTATION_OPTIONS = {
URL_ROOT: './',
@@ -24,7 +27,7 @@
<link rel="index" title="Index" href="genindex.html" />
<link rel="search" title="Search" href="search.html" />
</head>
- <body>
+ <body role="document">
<div class="related" role="navigation" aria-label="related navigation">
<h3>Navigation</h3>
<ul>
@@ -102,7 +105,7 @@
</div>
<div class="footer" role="contentinfo">
© Copyright 2016, CFEL Team.
- Created using <a href="http://sphinx-doc.org/">Sphinx</a> 1.6.3.
+ Created using <a href="http://sphinx-doc.org/">Sphinx</a> 1.5.6.
</div>
</body>
</html>
\ No newline at end of file
diff --git a/doc/build/html/objects.inv b/doc/build/html/objects.inv
index 3a4683af811c503ddd611e3e57561bcc002846b7..ec0b69617810b39692e04b3d4c1c20a3b1e6e378 100644
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