#!/bin/bash #SBATCH --partition=exfel #SBATCH --nodes=1 #SBATCH --ntasks-per-node=1 #SBATCH --time=8:00:00 #SBATCH --job-name=pes2spec #SBATCH -o slurm.%x.err.txt #SBATCH -e slurm.%x.err.txt #SBATCH --reservation=exfel_ml optstring="d:" DIR=results while getopts ${optstring} arg; do case ${arg} in d) DIR=${OPTARG} S=$OPTIND ;; *) S=$((OPTIND)) break ;; esac done OPTS="${@:$S}" echo "Options: $OPTS" source /usr/share/Modules/init/sh module load exfel exfel_anaconda3 cd $HOME/scratch/karabo/devices/pes_to_spec source env/bin/activate pwd export PYTHONPATH=$PYTHONPATH:$PWD mkdir $DIR do_it() { p=$1 r=$2 rt=$3 output=$DIR/p${p}r${r}t${rt} mkdir -p $output echo "Proposal $p, run $r, test at run $rt" CMD=(./pes_to_spec/test/offline_analysis.py -p $p -r $r -t $rt -d $output ${@:4}) echo "${CMD[*]}" ${CMD[*]} 2>&1 | tee $output/log.txt } do_it 900331 69 70 $OPTS # train in run 2 and test in run 3 #do_it 3384 2 3 $OPTS # new runs: #for run in 2 4 #do # do_it 3384 $run $run $OPTS #done # train in run 4 and test in run 3 #do_it 3384 4 3 $OPTS # old run #do_it 2828 206 206 $OPTS #do_it 2828 206 207 $OPTS #do_it 2828 207 207 $OPTS