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Commit e3c39a46 authored by Loïc Le Guyader's avatar Loïc Le Guyader
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DSSC fine timing analysis 

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1 merge request!184DSSC fine timing analysis
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doc/DSSC fine delay with SCS toolbox.ipynb 0 → 100644
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%% Cell type:code id:1bfd1581 tags:
``` python
import numpy as np
%matplotlib notebook
import matplotlib.pyplot as plt
plt.rcParams['figure.constrained_layout.use'] = True
import dask
print(f'dask: {dask.__version__}')
import toolbox_scs as tb
print(tb.__file__)
import toolbox_scs.routines.boz as boz
```
%% Output
dask: 2.11.0
/home/lleguy/notebooks/ToolBox/src/toolbox_scs/__init__.py
%% Cell type:code id:69c17cda tags:
``` python
runs = np.arange(775, 814+1)
delay = np.arange(4756930, 4756969+1)
```
%% Cell type:code id:b436e44e tags:
``` python
proposal = 2937
```
%% Cell type:markdown id:fdec2470 tags:
use first run as dark
%% Cell type:code id:6d5673f2 tags:
``` python
arr_dark, tid_dark = boz.load_dssc_module(proposal, runs[0])
dark = boz.average_module(arr_dark).compute()
```
%% Cell type:code id:542d140c tags:
``` python
intensity = np.zeros((len(runs)))
for k,r in enumerate(runs):
arr, tid = boz.load_dssc_module(proposal, r)
data = boz.average_module(arr, dark=dark).compute()
sensor = data[:,:,:256]
intensity[k] = sensor.mean(axis=(0,1,2))
```
%% Cell type:code id:eab988af tags:
``` python
plt.figure()
plt.plot(delay-delay[0], intensity)
plt.xlabel(f'delay - {delay[0]}')
plt.ylabel('<intensity>')
```
%% Output
Text(0, 0.5, '<intensity>')
%% Cell type:code id:369b3289 tags:
``` python
```
doc/changelog.rst
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...@@ -18,6 +18,7 @@ unreleased ...@@ -18,6 +18,7 @@ unreleased
- update version GATT-related mnemonics, add `transmission_col2` :mr:`172` - update version GATT-related mnemonics, add `transmission_col2` :mr:`172`
- reorganize the Howto section :mr:`169` - reorganize the Howto section :mr:`169`
- improve SLURM scripts with named arguments :mr:`176` - improve SLURM scripts with named arguments :mr:`176`
- adds notebook for DSSC fine timing analysis
- **New Features** - **New Features**
- add routine for fluence calibration :mr:`180` - add routine for fluence calibration :mr:`180`
......
doc/howtos.rst
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...@@ -79,6 +79,14 @@ hexagonal pixel shape information from the DSSC geometry to split ...@@ -79,6 +79,14 @@ hexagonal pixel shape information from the DSSC geometry to split
the intensity in a pixel in the bins covered by it. An example notebook the intensity in a pixel in the bins covered by it. An example notebook
:doc:`Azimuthal integration of DSSC with pyFAI <Azimuthal integration of DSSC with pyFAI>` is available. :doc:`Azimuthal integration of DSSC with pyFAI <Azimuthal integration of DSSC with pyFAI>` is available.
DSSC fine timing
################
When DSSC is reused after a period of inactivity or when the DSSC gain setting
use a different operation frequency the DSSC fine trigger delay needs to be
checked. To analysis runs recorded with different fine delay, one can use
the notebook :doc:`DSSC fine delay with SCS toolbox.ipynb <DSSC fine delay with SCS toolbox>`.
Legacy DSSC binning procedure Legacy DSSC binning procedure
############################# #############################
......
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