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Commit 5ae6113d authored by Mikhail Karnevskiy's avatar Mikhail Karnevskiy
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Add title page. Modify conf.py.

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cal_tools/cal_tools/conf_latex.patch deleted 100644 → 0
+ 0
− 10
View file @ eeb57d91
--- conf_orig.py 2018-08-27 11:53:53.069138000 +0200
+++ conf_latex.py 2018-08-27 11:53:18.472939000 +0200
@@ -257,6 +257,7 @@
# Latex figure (float) alignment
#
# 'figure_align': 'htbp',
+ 'extraclassoptions': ',openany, oneside',
}
# Grouping the document tree into LaTeX files. List of tuples
cal_tools/cal_tools/conf_latex.py deleted 100644 → 0
+ 0
− 347
View file @ eeb57d91
#!/usr/bin/env python3
# -*- coding: utf-8 -*-
#
# 'Tutorial Calculation ' documentation build configuration file, created by
# sphinx-quickstart on Thu Aug 23 12:23:00 2018.
#
# This file is execfile()d with the current directory set to its
# containing dir.
#
# Note that not all possible configuration values are present in this
# autogenerated file.
#
# All configuration values have a default; values that are commented out
# serve to show the default.
# If extensions (or modules to document with autodoc) are in another directory,
# add these directories to sys.path here. If the directory is relative to the
# documentation root, use os.path.abspath to make it absolute, like shown here.
#
# import os
# import sys
# sys.path.insert(0, os.path.abspath('.'))
# -- General configuration ------------------------------------------------
# If your documentation needs a minimal Sphinx version, state it here.
#
# needs_sphinx = '1.0'
# Add any Sphinx extension module names here, as strings. They can be
# extensions coming with Sphinx (named 'sphinx.ext.*') or your custom
# ones.
extensions = [
'sphinx.ext.intersphinx',
'sphinx.ext.mathjax',
]
# Add any paths that contain templates here, relative to this directory.
templates_path = ['_templates']
# The suffix(es) of source filenames.
# You can specify multiple suffix as a list of string:
#
# source_suffix = ['.rst', '.md']
source_suffix = '.rst'
# The encoding of source files.
#
# source_encoding = 'utf-8-sig'
# The master toctree document.
master_doc = 'index'
# General information about the project.
project = '\'Tutorial Calculation \''
copyright = '2018, \'Astrid Muennich\''
author = '\'Astrid Muennich\''
# The version info for the project you're documenting, acts as replacement for
# |version| and |release|, also used in various other places throughout the
# built documents.
#
# The short X.Y version.
version = ''
# The full version, including alpha/beta/rc tags.
release = ''
# The language for content autogenerated by Sphinx. Refer to documentation
# for a list of supported languages.
#
# This is also used if you do content translation via gettext catalogs.
# Usually you set "language" from the command line for these cases.
language = None
# There are two options for replacing |today|: either, you set today to some
# non-false value, then it is used:
#
# today = ''
#
# Else, today_fmt is used as the format for a strftime call.
#
# today_fmt = '%B %d, %Y'
# List of patterns, relative to source directory, that match files and
# directories to ignore when looking for source files.
# This patterns also effect to html_static_path and html_extra_path
exclude_patterns = ['_build', 'Thumbs.db', '.DS_Store']
# The reST default role (used for this markup: `text`) to use for all
# documents.
#
# default_role = None
# If true, '()' will be appended to :func: etc. cross-reference text.
#
# add_function_parentheses = True
# If true, the current module name will be prepended to all description
# unit titles (such as .. function::).
#
# add_module_names = True
# If true, sectionauthor and moduleauthor directives will be shown in the
# output. They are ignored by default.
#
# show_authors = False
# The name of the Pygments (syntax highlighting) style to use.
pygments_style = 'sphinx'
# A list of ignored prefixes for module index sorting.
# modindex_common_prefix = []
# If true, keep warnings as "system message" paragraphs in the built documents.
# keep_warnings = False
# If true, `todo` and `todoList` produce output, else they produce nothing.
todo_include_todos = False
# -- Options for HTML output ----------------------------------------------
# The theme to use for HTML and HTML Help pages. See the documentation for
# a list of builtin themes.
#
html_theme = 'alabaster'
# Theme options are theme-specific and customize the look and feel of a theme
# further. For a list of options available for each theme, see the
# documentation.
#
# html_theme_options = {}
# Add any paths that contain custom themes here, relative to this directory.
# html_theme_path = []
# The name for this set of Sphinx documents.
# "<project> v<release> documentation" by default.
#
# html_title = '\'Tutorial Calculation \' v'
# A shorter title for the navigation bar. Default is the same as html_title.
#
# html_short_title = None
# The name of an image file (relative to this directory) to place at the top
# of the sidebar.
#
# html_logo = None
# The name of an image file (relative to this directory) to use as a favicon of
# the docs. This file should be a Windows icon file (.ico) being 16x16 or 32x32
# pixels large.
#
# html_favicon = None
# Add any paths that contain custom static files (such as style sheets) here,
# relative to this directory. They are copied after the builtin static files,
# so a file named "default.css" will overwrite the builtin "default.css".
html_static_path = ['_static']
# Add any extra paths that contain custom files (such as robots.txt or
# .htaccess) here, relative to this directory. These files are copied
# directly to the root of the documentation.
#
# html_extra_path = []
# If not None, a 'Last updated on:' timestamp is inserted at every page
# bottom, using the given strftime format.
# The empty string is equivalent to '%b %d, %Y'.
#
# html_last_updated_fmt = None
# If true, SmartyPants will be used to convert quotes and dashes to
# typographically correct entities.
#
# html_use_smartypants = True
# Custom sidebar templates, maps document names to template names.
#
# html_sidebars = {}
# Additional templates that should be rendered to pages, maps page names to
# template names.
#
# html_additional_pages = {}
# If false, no module index is generated.
#
# html_domain_indices = True
# If false, no index is generated.
#
# html_use_index = True
# If true, the index is split into individual pages for each letter.
#
# html_split_index = False
# If true, links to the reST sources are added to the pages.
#
# html_show_sourcelink = True
# If true, "Created using Sphinx" is shown in the HTML footer. Default is True.
#
# html_show_sphinx = True
# If true, "(C) Copyright ..." is shown in the HTML footer. Default is True.
#
# html_show_copyright = True
# If true, an OpenSearch description file will be output, and all pages will
# contain a <link> tag referring to it. The value of this option must be the
# base URL from which the finished HTML is served.
#
# html_use_opensearch = ''
# This is the file name suffix for HTML files (e.g. ".xhtml").
# html_file_suffix = None
# Language to be used for generating the HTML full-text search index.
# Sphinx supports the following languages:
# 'da', 'de', 'en', 'es', 'fi', 'fr', 'h', 'it', 'ja'
# 'nl', 'no', 'pt', 'ro', 'r', 'sv', 'tr', 'zh'
#
# html_search_language = 'en'
# A dictionary with options for the search language support, empty by default.
# 'ja' uses this config value.
# 'zh' user can custom change `jieba` dictionary path.
#
# html_search_options = {'type': 'default'}
# The name of a javascript file (relative to the configuration directory) that
# implements a search results scorer. If empty, the default will be used.
#
# html_search_scorer = 'scorer.js'
# Output file base name for HTML help builder.
htmlhelp_basename = 'TutorialCalculationdoc'
# -- Options for LaTeX output ---------------------------------------------
latex_elements = {
# The paper size ('letterpaper' or 'a4paper').
#
# 'papersize': 'letterpaper',
# The font size ('10pt', '11pt' or '12pt').
#
# 'pointsize': '10pt',
# Additional stuff for the LaTeX preamble.
#
# 'preamble': '',
# Latex figure (float) alignment
#
# 'figure_align': 'htbp',
'extraclassoptions': ',openany, oneside',
}
# Grouping the document tree into LaTeX files. List of tuples
# (source start file, target name, title,
# author, documentclass [howto, manual, or own class]).
latex_documents = [
(master_doc, 'TutorialCalculation.tex', '\'Tutorial Calculation \' Documentation',
'\'Astrid Muennich\'', 'manual'),
]
# The name of an image file (relative to this directory) to place at the top of
# the title page.
#
# latex_logo = None
# For "manual" documents, if this is true, then toplevel headings are parts,
# not chapters.
#
# latex_use_parts = False
# If true, show page references after internal links.
#
# latex_show_pagerefs = False
# If true, show URL addresses after external links.
#
# latex_show_urls = False
# Documents to append as an appendix to all manuals.
#
# latex_appendices = []
# It false, will not define \strong, \code, itleref, \crossref ... but only
# \sphinxstrong, ..., \sphinxtitleref, ... To help avoid clash with user added
# packages.
#
# latex_keep_old_macro_names = True
# If false, no module index is generated.
#
# latex_domain_indices = True
# -- Options for manual page output ---------------------------------------
# One entry per manual page. List of tuples
# (source start file, name, description, authors, manual section).
man_pages = [
(master_doc, 'tutorialcalculation', '\'Tutorial Calculation \' Documentation',
[author], 1)
]
# If true, show URL addresses after external links.
#
# man_show_urls = False
# -- Options for Texinfo output -------------------------------------------
# Grouping the document tree into Texinfo files. List of tuples
# (source start file, target name, title, author,
# dir menu entry, description, category)
texinfo_documents = [
(master_doc, 'TutorialCalculation', '\'Tutorial Calculation \' Documentation',
author, 'TutorialCalculation', 'One line description of project.',
'Miscellaneous'),
]
# Documents to append as an appendix to all manuals.
#
# texinfo_appendices = []
# If false, no module index is generated.
#
# texinfo_domain_indices = True
# How to display URL addresses: 'footnote', 'no', or 'inline'.
#
# texinfo_show_urls = 'footnote'
# If true, do not generate a @detailmenu in the "Top" node's menu.
#
# texinfo_no_detailmenu = False
# Example configuration for intersphinx: refer to the Python standard library.
intersphinx_mapping = {'https://docs.python.org/': None}
cal_tools/cal_tools/conf_orig.py deleted 100644 → 0
+ 0
− 346
View file @ eeb57d91
#!/usr/bin/env python3
# -*- coding: utf-8 -*-
#
# 'Tutorial Calculation ' documentation build configuration file, created by
# sphinx-quickstart on Thu Aug 23 12:23:00 2018.
#
# This file is execfile()d with the current directory set to its
# containing dir.
#
# Note that not all possible configuration values are present in this
# autogenerated file.
#
# All configuration values have a default; values that are commented out
# serve to show the default.
# If extensions (or modules to document with autodoc) are in another directory,
# add these directories to sys.path here. If the directory is relative to the
# documentation root, use os.path.abspath to make it absolute, like shown here.
#
# import os
# import sys
# sys.path.insert(0, os.path.abspath('.'))
# -- General configuration ------------------------------------------------
# If your documentation needs a minimal Sphinx version, state it here.
#
# needs_sphinx = '1.0'
# Add any Sphinx extension module names here, as strings. They can be
# extensions coming with Sphinx (named 'sphinx.ext.*') or your custom
# ones.
extensions = [
'sphinx.ext.intersphinx',
'sphinx.ext.mathjax',
]
# Add any paths that contain templates here, relative to this directory.
templates_path = ['_templates']
# The suffix(es) of source filenames.
# You can specify multiple suffix as a list of string:
#
# source_suffix = ['.rst', '.md']
source_suffix = '.rst'
# The encoding of source files.
#
# source_encoding = 'utf-8-sig'
# The master toctree document.
master_doc = 'index'
# General information about the project.
project = '\'Tutorial Calculation \''
copyright = '2018, \'Astrid Muennich\''
author = '\'Astrid Muennich\''
# The version info for the project you're documenting, acts as replacement for
# |version| and |release|, also used in various other places throughout the
# built documents.
#
# The short X.Y version.
version = ''
# The full version, including alpha/beta/rc tags.
release = ''
# The language for content autogenerated by Sphinx. Refer to documentation
# for a list of supported languages.
#
# This is also used if you do content translation via gettext catalogs.
# Usually you set "language" from the command line for these cases.
language = None
# There are two options for replacing |today|: either, you set today to some
# non-false value, then it is used:
#
# today = ''
#
# Else, today_fmt is used as the format for a strftime call.
#
# today_fmt = '%B %d, %Y'
# List of patterns, relative to source directory, that match files and
# directories to ignore when looking for source files.
# This patterns also effect to html_static_path and html_extra_path
exclude_patterns = ['_build', 'Thumbs.db', '.DS_Store']
# The reST default role (used for this markup: `text`) to use for all
# documents.
#
# default_role = None
# If true, '()' will be appended to :func: etc. cross-reference text.
#
# add_function_parentheses = True
# If true, the current module name will be prepended to all description
# unit titles (such as .. function::).
#
# add_module_names = True
# If true, sectionauthor and moduleauthor directives will be shown in the
# output. They are ignored by default.
#
# show_authors = False
# The name of the Pygments (syntax highlighting) style to use.
pygments_style = 'sphinx'
# A list of ignored prefixes for module index sorting.
# modindex_common_prefix = []
# If true, keep warnings as "system message" paragraphs in the built documents.
# keep_warnings = False
# If true, `todo` and `todoList` produce output, else they produce nothing.
todo_include_todos = False
# -- Options for HTML output ----------------------------------------------
# The theme to use for HTML and HTML Help pages. See the documentation for
# a list of builtin themes.
#
html_theme = 'alabaster'
# Theme options are theme-specific and customize the look and feel of a theme
# further. For a list of options available for each theme, see the
# documentation.
#
# html_theme_options = {}
# Add any paths that contain custom themes here, relative to this directory.
# html_theme_path = []
# The name for this set of Sphinx documents.
# "<project> v<release> documentation" by default.
#
# html_title = '\'Tutorial Calculation \' v'
# A shorter title for the navigation bar. Default is the same as html_title.
#
# html_short_title = None
# The name of an image file (relative to this directory) to place at the top
# of the sidebar.
#
# html_logo = None
# The name of an image file (relative to this directory) to use as a favicon of
# the docs. This file should be a Windows icon file (.ico) being 16x16 or 32x32
# pixels large.
#
# html_favicon = None
# Add any paths that contain custom static files (such as style sheets) here,
# relative to this directory. They are copied after the builtin static files,
# so a file named "default.css" will overwrite the builtin "default.css".
html_static_path = ['_static']
# Add any extra paths that contain custom files (such as robots.txt or
# .htaccess) here, relative to this directory. These files are copied
# directly to the root of the documentation.
#
# html_extra_path = []
# If not None, a 'Last updated on:' timestamp is inserted at every page
# bottom, using the given strftime format.
# The empty string is equivalent to '%b %d, %Y'.
#
# html_last_updated_fmt = None
# If true, SmartyPants will be used to convert quotes and dashes to
# typographically correct entities.
#
# html_use_smartypants = True
# Custom sidebar templates, maps document names to template names.
#
# html_sidebars = {}
# Additional templates that should be rendered to pages, maps page names to
# template names.
#
# html_additional_pages = {}
# If false, no module index is generated.
#
# html_domain_indices = True
# If false, no index is generated.
#
# html_use_index = True
# If true, the index is split into individual pages for each letter.
#
# html_split_index = False
# If true, links to the reST sources are added to the pages.
#
# html_show_sourcelink = True
# If true, "Created using Sphinx" is shown in the HTML footer. Default is True.
#
# html_show_sphinx = True
# If true, "(C) Copyright ..." is shown in the HTML footer. Default is True.
#
# html_show_copyright = True
# If true, an OpenSearch description file will be output, and all pages will
# contain a <link> tag referring to it. The value of this option must be the
# base URL from which the finished HTML is served.
#
# html_use_opensearch = ''
# This is the file name suffix for HTML files (e.g. ".xhtml").
# html_file_suffix = None
# Language to be used for generating the HTML full-text search index.
# Sphinx supports the following languages:
# 'da', 'de', 'en', 'es', 'fi', 'fr', 'h', 'it', 'ja'
# 'nl', 'no', 'pt', 'ro', 'r', 'sv', 'tr', 'zh'
#
# html_search_language = 'en'
# A dictionary with options for the search language support, empty by default.
# 'ja' uses this config value.
# 'zh' user can custom change `jieba` dictionary path.
#
# html_search_options = {'type': 'default'}
# The name of a javascript file (relative to the configuration directory) that
# implements a search results scorer. If empty, the default will be used.
#
# html_search_scorer = 'scorer.js'
# Output file base name for HTML help builder.
htmlhelp_basename = 'TutorialCalculationdoc'
# -- Options for LaTeX output ---------------------------------------------
latex_elements = {
# The paper size ('letterpaper' or 'a4paper').
#
# 'papersize': 'letterpaper',
# The font size ('10pt', '11pt' or '12pt').
#
# 'pointsize': '10pt',
# Additional stuff for the LaTeX preamble.
#
# 'preamble': '',
# Latex figure (float) alignment
#
# 'figure_align': 'htbp',
}
# Grouping the document tree into LaTeX files. List of tuples
# (source start file, target name, title,
# author, documentclass [howto, manual, or own class]).
latex_documents = [
(master_doc, 'TutorialCalculation.tex', '\'Tutorial Calculation \' Documentation',
'\'Astrid Muennich\'', 'manual'),
]
# The name of an image file (relative to this directory) to place at the top of
# the title page.
#
# latex_logo = None
# For "manual" documents, if this is true, then toplevel headings are parts,
# not chapters.
#
# latex_use_parts = False
# If true, show page references after internal links.
#
# latex_show_pagerefs = False
# If true, show URL addresses after external links.
#
# latex_show_urls = False
# Documents to append as an appendix to all manuals.
#
# latex_appendices = []
# It false, will not define \strong, \code, itleref, \crossref ... but only
# \sphinxstrong, ..., \sphinxtitleref, ... To help avoid clash with user added
# packages.
#
# latex_keep_old_macro_names = True
# If false, no module index is generated.
#
# latex_domain_indices = True
# -- Options for manual page output ---------------------------------------
# One entry per manual page. List of tuples
# (source start file, name, description, authors, manual section).
man_pages = [
(master_doc, 'tutorialcalculation', '\'Tutorial Calculation \' Documentation',
[author], 1)
]
# If true, show URL addresses after external links.
#
# man_show_urls = False
# -- Options for Texinfo output -------------------------------------------
# Grouping the document tree into Texinfo files. List of tuples
# (source start file, target name, title, author,
# dir menu entry, description, category)
texinfo_documents = [
(master_doc, 'TutorialCalculation', '\'Tutorial Calculation \' Documentation',
author, 'TutorialCalculation', 'One line description of project.',
'Miscellaneous'),
]
# Documents to append as an appendix to all manuals.
#
# texinfo_appendices = []
# If false, no module index is generated.
#
# texinfo_domain_indices = True
# How to display URL addresses: 'footnote', 'no', or 'inline'.
#
# texinfo_show_urls = 'footnote'
# If true, do not generate a @detailmenu in the "Top" node's menu.
#
# texinfo_no_detailmenu = False
# Example configuration for intersphinx: refer to the Python standard library.
intersphinx_mapping = {'https://docs.python.org/': None}
cal_tools/cal_tools/tools.py
+ 55
− 23
View file @ 5ae6113d
...@@ -181,33 +181,39 @@ def make_report(run_path, tmp_path, out_path, project, author, version, report_t ...@@ -181,33 +181,39 @@ def make_report(run_path, tmp_path, out_path, project, author, version, report_t
"--ext-mathjax", "--ext-mathjax",
"--makefile", "--makefile",
"--no-batchfile", run_path]) "--no-batchfile", run_path])
# now conf.py exists in temp folder, so add latex options to remove empty pages
patch_path = "{}".format(os.path.abspath(os.path.dirname(__file__)))
patch_file = ("{}/conf_latex.patch".format(patch_path))
try:
subprocess.check_call(["patch",
"{}/sphinx_rep/conf.py".format(tmp_path),
patch_file])
except:
print("Patching latex conf failed")
try:
subprocess.check_call(["sed",
"-i",
"-e",
"s/{}.tex/{}.tex/g".format(project.replace(" ", ""), report_name),
"{}/sphinx_rep/conf.py".format(tmp_path)], shell=False)
except:
print("SEDing tex failed")
except subprocess.CalledProcessError: except subprocess.CalledProcessError:
raise Exception("Failed to run sphinx-quickbuild. Is sphinx installed?" raise Exception("Failed to run sphinx-quickbuild. Is sphinx installed?"
"Generated simple index.rst instead") "Generated simple index.rst instead")
# quickbuild went well we need to edit the index file # quickbuild went well we need to edit the index.rst and conf.py files
from shutil import move from shutil import move
module_path = "{}".format(os.path.abspath(os.path.dirname(__file__)))
with open("{}/conf.py.tmp".format(run_path), "w") as mf:
with open("{}/conf.py".format(run_path), "r") as mfr:
for line in mfr:
if line == '# latex_logo = None\n':
mf.write("latex_logo = '{}/xfel.jpg'\n".format(module_path))
mf.write("latex_additional_files = ['titlepage.tex.txt']\n")
elif line == 'latex_elements = {\n':
mf.write(line)
mf.write(" 'extraclassoptions': ',openany, oneside',\n")
mf.write(" 'maketitle': r'\input{titlepage.tex.txt}',\n")
elif '{}.tex'.format(project.replace(" ", "")) in line:
line.replace('{}.tex'.format(project.replace(" ", "")),
'{}.tex'.format(report_name))
mf.write(line)
else:
mf.write(line)
_ = os.getcwd()
os.remove("{}/conf.py".format(run_path))
move("{}/conf.py.tmp".format(run_path), "{}/conf.py".format(run_path))
direntries = os.listdir(run_path) direntries = os.listdir(run_path)
files_to_handle = [] files_to_handle = []
for entry in direntries: for entry in direntries:
...@@ -247,10 +253,35 @@ def make_report(run_path, tmp_path, out_path, project, author, version, report_t ...@@ -247,10 +253,35 @@ def make_report(run_path, tmp_path, out_path, project, author, version, report_t
shutil.copy(f, out_path) shutil.copy(f, out_path)
print("Removing temporary files at: {}".format(tmp_path)) print("Removing temporary files at: {}".format(tmp_path))
shutil.rmtree(tmp_path) shutil.rmtree(tmp_path)
def make_titlepage(sphinx_path, project, data_path):
with open("{}/titlepage.tex.txt".format(sphinx_path), "w+") as gfile:
gfile.write('\\begin{titlepage}\n')
gfile.write(' \\centering\n')
gfile.write(' \\vspace*{40mm}\n')
gfile.write(' \\textbf{\\Huge {')
gfile.write(project)
gfile.write('}}\n')
gfile.write(' \\vspace{0mm}\n\n')
gfile.write(' \\begin{figure}[!h]\n')
gfile.write(' \\centering\n')
gfile.write(' \\includegraphics[scale=0.3]{xfel.jpg}\n')
gfile.write(' \\end{figure}\n\n')
gfile.write(' \\vspace{0mm}\n')
gfile.write(' \\Large \\textbf{{Detector group}}\n\n')
gfile.write(' Based on data sample: {}\n\n'.format(data_path))
gfile.write(' Release : 0.1\n\n')
gfile.write(' \\vspace*{0mm}\n')
gfile.write(' \\today\n')
gfile.write(' \\vfill\n')
gfile.write(' \\textit{For internal use only}\n')
gfile.write('\\end{titlepage}\n')
gfile.write("\n\n")
def finalize(joblist, finaljob, run_path, out_path, project, calibration, def finalize(joblist, finaljob, run_path, out_path, project, calibration,
author, version, report_to): author, version, report_to, data_path='Unknown'):
print("Waiting on jobs to finish: {}".format(joblist)) print("Waiting on jobs to finish: {}".format(joblist))
while True: while True:
...@@ -267,6 +298,7 @@ def finalize(joblist, finaljob, run_path, out_path, project, calibration, ...@@ -267,6 +298,7 @@ def finalize(joblist, finaljob, run_path, out_path, project, calibration,
prepare_plots(run_path) prepare_plots(run_path)
make_timing_summary(run_path, joblist+[str(finaljob)]) make_timing_summary(run_path, joblist+[str(finaljob)])
sphinx_path = combine_report(run_path, calibration) sphinx_path = combine_report(run_path, calibration)
make_titlepage(sphinx_path, project, data_path)
make_report(sphinx_path, run_path, out_path, project, author, version, make_report(sphinx_path, run_path, out_path, project, author, version,
report_to) report_to)
......
cal_tools/setup.py
+ 0
− 1
View file @ 5ae6113d
...@@ -4,7 +4,6 @@ setup( ...@@ -4,7 +4,6 @@ setup(
name='calTools', name='calTools',
version='0.1', version='0.1',
packages=['cal_tools',], packages=['cal_tools',],
package_data={'': ['conf_latex.patch']},
url='', url='',
license='(c) European XFEL GmbH', license='(c) European XFEL GmbH',
author='Steffen Hauf', author='Steffen Hauf',
......
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