Commits · 69a87b0a5555183ec4b109324fa309c2c03ef144 · calibration / pycalibration · GitLab

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Nov 12, 2021
- isort imports · 69a87b0a
  Thomas Kluyver authored 3 years ago
  
  69a87b0a
- Improve warnings/errors around concurrency parameter · 7cfe3c34
  Thomas Kluyver authored 3 years ago
  
  7cfe3c34
- Refactor parsing command line args & loading main notebook · d784e473
  Thomas Kluyver authored 3 years ago
  
  d784e473
- Accept argv as input to various functions · 536bfed6
  Thomas Kluyver authored 3 years ago
  
  536bfed6
- Extract functions relating to notebook arguments to a new module · 00a0ad26
  Thomas Kluyver authored 3 years ago
  
  00a0ad26
Nov 10, 2021
- Clarify reproducibility warnings and replace confirmation prompt by early exit · bea42570
  Philipp Schmidt authored 3 years ago
  
  bea42570
Nov 09, 2021
- Queue finalize job in upex-middle rather than exfel · 77f7b3b2
  Philipp Schmidt authored 3 years ago
  
  77f7b3b2
Oct 21, 2021
- Add --not-reproducible flag to xfel-calibrate to skip confirmation · 7981f6d2
  Philipp Schmidt authored 3 years ago
  
  7981f6d2
- Add warning to xfel-calibrate if configuration may cause result to not be reproducible · 6adc6b7a
  Philipp Schmidt authored 3 years ago
  
  6adc6b7a
- Add --skip-env-freeze flag to xfel-calibrate to skip pip freeze step · 85ddd210
  Philipp Schmidt authored 3 years ago
  
  85ddd210
Oct 20, 2021
- fix finalize.py script · 5de9fde2
  Karim Ahmed authored 3 years ago
  
  5de9fde2
- [CORRECT] Fix title reports for multiple detectors per run folder · 108a0813
  Karim Ahmed authored 3 years ago
  
  108a0813
- Fix slurm's nice flag formatting · f3ee65fc
  Cyril Danilevski authored 3 years ago
  
  f3ee65fc
Oct 19, 2021
- Add xfel-calibrate option to skip report generation · f312e1f5
  Philipp Schmidt authored 3 years ago
  
  f312e1f5
Oct 17, 2021
- Fix missing string conversion for slurm-scheduling argument · 55b7c136
  Philipp Schmidt authored 3 years ago
  
  55b7c136
Oct 05, 2021
- check_output() takes an input kwarg, check_call() doesn't · 12752fb3
  Thomas Kluyver authored 3 years ago
  
  12752fb3
Oct 01, 2021
- Use explicit local dir so script can run directly · 76817ab7
  Thomas Kluyver authored 3 years ago
  
  76817ab7
- Clarify how dep_job_ids changes · 7b23765a
  Thomas Kluyver authored 3 years ago
  
  7b23765a
Sep 29, 2021
- Rename JobGroup -> JobChain, add docstrings · 4e64ee3d
  Thomas Kluyver authored 3 years ago
  
  4e64ee3d
Sep 24, 2021
- Add xfel-calibrate --constants-from option to reuse constant info from a calibration_metadata.yml · 172adc2f
  Thomas Kluyver authored 3 years ago
  
  172adc2f
- Ignore existing calibration_metadata.yml in xfel-calibrate · d356d0e8
  Thomas Kluyver authored 3 years ago
  
  d356d0e8
- Copy bash script to run notebook to working directory · e9bdc837
  Thomas Kluyver authored 3 years ago
  
  e9bdc837
- Apply suggestion to src/xfel_calibrate/calibrate.py · 7d03a959
  Thomas Kluyver authored 3 years ago
  
  7d03a959
- Need a Path object, not a str · 4d35534c
  Thomas Kluyver authored 3 years ago
  
  4d35534c
- Copy calibration_metadata.yml when --prepare-only is used · b2d76a6b
  Thomas Kluyver authored 3 years ago
  
  b2d76a6b
- Add --prepare-only option for xfel-calibrate · cfa9e8ab
  Thomas Kluyver authored 3 years ago
  
  cfa9e8ab
- Fix user venv test · f9c00f3e
  Thomas Kluyver authored 3 years ago
  
  f9c00f3e
- Save string path to python instead of Path object in YAML · 0afe5941
  Thomas Kluyver authored 3 years ago
  
  0afe5941
- Fix tests · 03fa7969
  Thomas Kluyver authored 3 years ago
  
  03fa7969
- Rethink what information goes in which file · 0f55c690
  Thomas Kluyver authored 3 years ago
  
  0f55c690
- Run finalize step after repeating task · bb3a6a25
  Thomas Kluyver authored 3 years ago
  
  bb3a6a25
- Make class to store Slurm related options · 4e26f4df
  Thomas Kluyver authored 3 years ago
  
  4e26f4df
- Use CWD for notebook paths · 8bf6fb7e
  Thomas Kluyver authored 3 years ago
  
  8bf6fb7e
- after_ok and after_any are optional · d2fce235
  Thomas Kluyver authored 3 years ago
  
  d2fce235
- Fix pip command · 171f495d
  Thomas Kluyver authored 3 years ago
  
  171f495d
- Initial prototype of describing jobs for reproducing work · 9b6e0cf1
  Thomas Kluyver authored 3 years ago
  
  9b6e0cf1
Sep 21, 2021
- Append to .out files for pre-emptable finalize job · 7c7289a5
  Thomas Kluyver authored 3 years ago
  
  7c7289a5
Sep 10, 2021
- Remove unused import · 7a6b505b
  Thomas Kluyver authored 3 years ago
  
  7a6b505b
- Simplify getting command line arguments to fill notebook template path · 33376963
  Thomas Kluyver authored 3 years ago
  
  33376963
- Use string.Formatter.parse to get variables from path template · 6009d214
  Thomas Kluyver authored 3 years ago
  
  6009d214

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