Commits · d92f10fcc2540eecdde1fb2ee22eb5ae50897c82 · calibration / pycalibration

Feb 10, 2022

Merge branch 'fix/AGIPD_dark_one_module_inp_list' into 'master' · d92f10fc

Karim Ahmed authored 3 years ago

Fix: [AGIPD][DARK] index out of range in case of running for one module

See merge request detectors/pycalibration!616

d92f10fc

Feb 02, 2022

Merge branch 'override-gain-mode' into 'master' · b78f67c9

Thomas Kluyver authored 3 years ago

[AGIPD] [Correct] Add parameter for gain_mode in AGIPD correction

See merge request detectors/pycalibration!617

b78f67c9

Feb 01, 2022
- Merge branch 'fix/sequences_par_pnccd' into 'master' · 2c0da84b
  Karim Ahmed authored 3 years ago
  
  [PNCCD][CORRECT] -1 sequences by default See merge request detectors/pycalibration!618
  2c0da84b
Jan 26, 2022
- auto -> adaptive in help message · a397fc30
  Thomas Kluyver authored 3 years ago
  
  a397fc30
- auto -> adaptive in help message · 2bc863b7
  Thomas Kluyver authored 3 years ago
  
  2bc863b7
- -1 sequences by default · 8c4a8dc5
  Karim Ahmed authored 3 years ago
  
  8c4a8dc5
Jan 24, 2022

Merge branch 'fix/jf_plotting_arrays' into 'master' · 1de77e05

Karim Ahmed authored 3 years ago

[FIX][JUNGFRAU][CORRECT] Index first cell for single cell corrected data

See merge request detectors/pycalibration!614

1de77e05

Jan 20, 2022
- Add parameter for gain_mode in AGIPD correction · 18ca0052
  Thomas Kluyver authored 3 years ago
  
  18ca0052
- plot first cell in burst and single cell · 2f81a439
  Karim Ahmed authored 3 years ago
  
  2f81a439
- Merge branch 'feat/read_with_EXtra_data' into 'master' · c3234477
  Karim Ahmed authored 3 years ago
  
  [EPIX100] Reading ePix100 data with EXtra-data, Correct and Dark notebooks. See merge request detectors/pycalibration!500
  c3234477
- [EPIX100] Reading data using EXtra-data for both Correct and Dark notebooks. · 183003a7
  Karim Ahmed authored 3 years ago
  
  Using pasha and removing ipyparallel for parallelization and avoiding the use of pyDetlib for noise and offset calculation
  183003a7
Jan 19, 2022
- Merge branch 'feat/no-longer-copy-unprocessed-data' into 'master' · b468a401
  Philipp Schmidt authored 3 years ago
  
  No longer copy untouched data files to the output directory before processing See merge request detectors/pycalibration!612
  b468a401
- Merge branch 'feat/disable-correct-per-detector' into 'master' · 67e9e87a
  Philipp Schmidt authored 3 years ago
  
  Allow only corrections to be disabled in data mappings See merge request detectors/pycalibration!611
  67e9e87a
Jan 18, 2022
- Fix: [AGIPD][DARK] index out of range in case of running for one module · 9fd52cf5
  Karim Ahmed authored 3 years ago
  
  9fd52cf5
Jan 17, 2022
- [FIX][JUNGFRAU][CORRECT] Index first cell for single cell corrected data · b6e7d2b9
  Karim Ahmed authored 3 years ago
  
  b6e7d2b9
- No longer copy untouched data files to the output directory before processing · 5ae2fdb3
  Philipp Schmidt authored 3 years ago
  
  5ae2fdb3
Jan 14, 2022
- Allow only corrections to be disabled in data mappings · 85a21016
  Philipp Schmidt authored 3 years ago
  
  85a21016
Jan 12, 2022

Merge branch 'feat/Extra_data_pnCCD' into 'master' · 9fe89b8d

Karim Ahmed authored 3 years ago

[pnCCD] [CORRECT][DARK] EXtra-data, processing using pasha, and parallel correction for different sequence files.

See merge request detectors/pycalibration!559

9fe89b8d

Dec 20, 2021

Merge branch 'master' into 'feat/read_with_EXtra_data_Jungfrau' · 2e05cca2

Thomas Kluyver authored 3 years ago

# Conflicts:
#   notebooks/Jungfrau/Jungfrau_Gain_Correct_and_Verify_NBC.ipynb
#   notebooks/Jungfrau/Jungfrau_dark_analysis_all_gains_burst_mode_NBC.ipynb

2e05cca2

Dec 13, 2021
- Merge branch 'fix/xfel-calibrate-args-rework' into 'master' · 85605a4b
  Philipp Schmidt authored 3 years ago
  
  Fix missing switch from key to attribute access in xfel-calibrate args after rework See merge request detectors/pycalibration!608
  85605a4b
- Fix missing switch from key to attribute access in xfel-calibrate args after rework · 833921d1
  Philipp Schmidt authored 3 years ago
  
  833921d1
Dec 10, 2021

Merge branch 'feat/agipd_lit_frame_finder' into 'master' · 930d8df1

Egor Sobolev authored 3 years ago

Add selection of lit frames using AgipdLitFrameFinder device

See merge request detectors/pycalibration!603

930d8df1

Dec 07, 2021
- Merge branch 'fix/remi-old-files' into 'master' · 8e18be82
  Philipp Schmidt authored 3 years ago
  
  [REMI] Add compatibility with old DAQ files See merge request detectors/pycalibration!607
  8e18be82
- Merge branch 'rm-auto-reservation' into 'master' · 0e8bfd73
  Thomas Kluyver authored 3 years ago
  
  Remove unused code to automatically select Slurm reservation See merge request detectors/pycalibration!590
  0e8bfd73
Dec 06, 2021
- Don't pass --priority from webservice to xfel-calibrate · 47db95d9
  Thomas Kluyver authored 3 years ago
  
  47db95d9
- Remove some unused settings · 4e93002d
  Thomas Kluyver authored 3 years ago
  
  4e93002d
- Use ndarray.nonzero() rather than np.where() in REMI reconstruct · db81d25f
  Philipp Schmidt authored 3 years ago
  
  db81d25f
- Merge branch 'fix/process_sequences_with_highest_trainIds' into 'master' · aee1ae3e
  Karim Ahmed authored 3 years ago
  
  [AGIPD][DARK] FIX: Make sure to process darks out of sequence file with the highest trainIds See merge request detectors/pycalibration!601
  aee1ae3e
- Make plots in REMI reconstruct robust against bad data · a7d0b67c
  Philipp Schmidt authored 3 years ago
  
  a7d0b67c
- Fix edge trigger and add compatibility for old DAQ files in REMI reconstruct notebook · f4b844e7
  Philipp Schmidt authored 3 years ago
  
  f4b844e7
Dec 02, 2021
- apply suggested refactors · 4fae716d
  Karim Ahmed authored 3 years ago
  
  4fae716d
Dec 01, 2021
- Merge branch 'fix/report_partition' into 'master' · f1b4a261
  Karim Ahmed authored 3 years ago
  
  Fix / report partition same as action slurm partition See merge request detectors/pycalibration!606
  f1b4a261
- Remove unused code to automatically select Slurm reservation · 89971d05
  Thomas Kluyver authored 3 years ago
  
  89971d05
Nov 30, 2021
- Return back the validation of max_pulses · 6bb3a22c
  Egor Sobolev authored 3 years ago
  
  Co-authored-by: Karim Ahmed <karim.ahmed@xfel.eu>
  6bb3a22c
- Apply suggestions of reviewers · 0e91ff85
  Egor Sobolev authored 3 years ago
  
  Co-authored-by: Thomas Kluyver <thomas.kluyver@xfel.eu> Co-authored-by: Karim Ahmed <karim.ahmed@xfel.eu>
  0e91ff85
Nov 25, 2021
- repalce if/else with or · ebd57c4f
  Thomas Kluyver authored 3 years ago and Karim Ahmed committed 3 years ago
  
  ebd57c4f
- avoid using dedicated partition for reports · cc4eec7e
  Karim Ahmed authored 3 years ago
  
  cc4eec7e
- Fix / report_slurm_partition to switch requirements for xcal and users · abcd9441
  Karim Ahmed authored 3 years ago
  
  abcd9441
Nov 22, 2021
- Update pnccd correct based on MR comments · 2b99c4d1
  Karim Ahmed authored 3 years ago
  
  2b99c4d1
Nov 16, 2021
- Fix minor issues and code style · 5803b7e6
  Egor Sobolev authored 3 years ago
  
  5803b7e6