Skip to content
Snippets Groups Projects

feat[Epix100][Correct]: New corrected data source and a link to old data source

Merged feat[Epix100][Correct]: New corrected data source and a link to old data source
feat/epix_new_correct_souce into master
Merged Karim Ahmed requested to merge feat/epix_new_correct_souce into master
Viewing commit b77f0438
Prev Next
Show latest version
1 file
+ 2
− 4
Compare changes
  • Side-by-side
  • Inline
notebooks/ePix100/Correction_ePix100_NBC.ipynb
+ 2
− 4
seq_file = seq_dc.files[0] # FileAccess
seq_file = seq_dc.files[0] # FileAccess
# Create INDEX datasets.
# Create INDEX datasets.
ofile.create_index(seq_dc.train_ids, from_file=seq_dc.files[0])
ofile.create_index(seq_dc.train_ids, from_file=seq_dc.files[0])
# Create METDATA datasets
# Create METADATA datasets
ofile.create_metadata(
ofile.create_metadata(
like=seq_dc,
like=seq_dc,
sequence=seq_file.sequence,
sequence=seq_file.sequence,
"data.image.patterns", data=data_patterns, chunks=dataset_chunk)
"data.image.patterns", data=data_patterns, chunks=dataset_chunk)
if output_src != input_src:
if output_src != input_src:
ofile[f'/INSTRUMENT/{input_src}'] = h5py.SoftLink(f'/INSTRUMENT/{output_src}')
ofile.create_legacy_source(input_src, output_src)
ofile[f'/INDEX/{input_src}'] = h5py.SoftLink(f'/INDEX/{output_src}')
step_timer.done_step('Storing data.')
step_timer.done_step('Storing data.')
if empty_seq == len(seq_files):
if empty_seq == len(seq_files):

Legal Notice | Contacts