Update README to reflect no longer using requirements.txt
Update CI to use new setup
Generates venv for tests each time to ensure runner local env is not used
Added --ignore=tests/legacy flag to pytest to ignore legacy test dir
Added --cov=cal_tools and --cov=xfel_calibrate to get coverage output for both modules
Added ssh key variable to CI, added .setup-ssh-euxfel-gitlab template to CI
Change internal dependencies to use SSH instead of files (this is now possible as xsoft has a keypair on gitlab)
These changes make the installation of the package a bit more standard, removes the step of having to run two install commands (one for requirements.txt, and one for .), and let us use extras to define additional optional dependencies (e.g. test, dev, etc...).
How Has This Been Tested?
Tested locally by running pip install without extras, with test, with dev, and with test,dev, then ran the pytests to check that everything was still working correctly.
Also updated the CI definition to use the new setup style, so the tests also executed with the pipeline.
Relevant Documents (optional)
Types of changes
Bug fix (non-breaking change which fixes an issue)
For our local dependencies the name of the package doesn't match the name of the repository, so I have to explicitly write out the name, and then use the git ssh url as a target, e.g. iCalibrationDB @ git+ssh://git@git.xfel.eu:10022/detectors/cal_db_interactive.git@2.0.1. @kluyvert does this look correct?
