[AGIPD][CORRECT] Use calcat_interface and remove precorrection notebook

Description

Updating AGIPD correction notebooks for using calcat_interface and avoiding calibrationDBRemote and cal_db_interactive

Note: This MR is based on https://git.xfel.eu/detectors/pycalibration/-/merge_requests/773

Related to https://git.xfel.eu/calibration/planning/-/issues/150 and https://git.xfel.eu/calibration/planning/-/issues/168

1. Remove notebooks/AGIPD/AGIPD_Retrieve_Constants_Precorrection.ipynb
2. Remove cal_tools/agipdlib functions for loading constants from YAML or DB. Also, remove related tests.
3. Move to retrieve and initialize constants to the AGIPD correction notebook.
4. Use a new feature for displaying the markdown table for retrieved constants.
5. Fix a bug when displaying one retrieved constant in CalibrationData metadata object.
6. Use a fragment file to store retrieved constants.
7. Clean-ups around related code.

How Has This Been Tested?

• Testing..

Relevant Documents (optional)

Types of changes

• New feature (non-breaking change which adds functionality)
• Bug fix (non-breaking change which fixes an issue)

Checklist:

Reviewers

@schmidtp @kluyvert

changed title from Agipd correction using calcat_interface to [AGIPD][CORRECT] using calcat_interface

added 1 commit

• a9a11e9b - update test_cal_tools

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added 1 commit

• e2f3c228 - add calcat_interface file for the tests to run

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added In Progress New CALCAT interface labels

added Testing label and removed In Progress label

changed the description

changed milestone to %3.8.0

added 1 commit

• e92dbc8d - restful config client

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deleted the fix/small_agipd_corr_improvements branch. This merge request now targets the master branch

added 1 commit

• add86469 - fix precorrection notebook and _build condition

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added 62 commits

• add86469...1c5290cc - 20 commits from branch master
• 19033cb0 - Draft: new calcat interface and corresponding updates in the correction notebook
• 50fb68ec - Expose calcat_interface in the docs
• e926128f - change calibration.py to calcat_interface.py and refactors
• 5ed9ecf1 - retest epix100 and add warning
• 7dbe4400 - calcat_interface_lpd_epix_jf
• 3faf72c3 - epix100 changes
• c62d83ea - Update agipd correction
• e735ea2f - update calcat_interface after testing notebooks
• 88acf12c - update pnccd
• d14acc38 - use snapshot for epix100
• 32dde25f - update lpd notebook
• 1defc617 - update gotthard2
• 3b08ec1b - update jungfrau
• d01191d0 - fix tests/test_cal_tools
• f7e98305 - add restful_config to notebooks
• 437faea2 - add da_to argument and apply black
• b1ef743a - add missing client input args
• 14018b95 - update da_to to module_naming
• c3648eaf - epix fixes
• 97911561 - remove agipd changes
• 161d4cd6 - remove jungfrau changes
• e7631e0a - remove pnccd changes
• b1cabe04 - remove epix100 changes
• 58845f6f - remove Gotthard2 changes
• 070d574f - remove LPD changes
• 2ac3e42e - remove cal_tools.tools changes
• c55c4575 - remove development pieces
• 1f67f1cb - snapshot_at to pdu_snapshot_at, restful_config.calibration_client(), and move...
• a2280278 - add module naming back in CalCatApi
• 5fff3ca6 - add test
• a337f9b6 - add more tests
• 3d5b449e - fix ndarray and fix format_time time format to calcat expected isoformat
• 30494205 - remove pdu_snapshot_at from CalibrationData
• 64d1ee56 - update calibration client version
• b5fd3784 - fix DSSC_CalibrationData
• 1a53b90e - consider illuminated conditions for pnCCD
• e93a8de7 - remove noise from conflict resoving
• 9b07fe24 - Agipd correction using calcat_interface
• ff47109f - update test_cal_tools
• f5b5b1b2 - add calcat_interface file for the tests to run
• 6bec163a - restful config client
• 35de93ae - fix precorrection notebook and _build condition

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marked this merge request as draft from 19033cb0

removed Testing label

marked this merge request as ready

changed target branch from master to feat/new_calcat_interface

added 1 commit

• 835f5409 - fix tests/test_cal_tools.py::test_raise_initialize_from_db

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deleted the feat/new_calcat_interface branch. This merge request now targets the master branch

removed milestone %3.8.0

added 69 commits

• 835f5409...4a94f782 - 62 commits from branch master
• 123b0eeb - Agipd correction using calcat_interface
• 843c6675 - update test_cal_tools
• 152c85ae - add calcat_interface file for the tests to run
• 5513999b - restful config client
• 73cc187b - fix precorrection notebook and _build condition
• 02f96bfc - fix tests/test_cal_tools.py::test_raise_initialize_from_db
• a1972ad6 - move const functions to enable correction of modules with no dark constants

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added 1 commit

• d79af49f - put back functions in agiplib and fix tests

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