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Commit 6b062dbc authored by Valerio Mariani's avatar Valerio Mariani
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Merge branch 'testing'

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cfel_cxi.py
+ 14
− 45
View file @ 6b062dbc
......@@ -435,7 +435,7 @@ class CXIWriter:
return self._fh
def are_stacks_initialized(self):
def stacks_are_initialized(self):
"""Checks if stacks are initialized.
Checks the status of the stacks in the file and returns the status to the user.
......@@ -447,6 +447,19 @@ class CXIWriter:
return self._initialized
def file_is_full(self):
"""Checks if the file is full.
Checks if the file is full (i.e. the maximum number of slices have already been written), and returns the
information to the user.
Returns:
status (bool): True if the file is full, False otherwise.
"""
return self._curr_slice >= self._max_num_slices
def close_file(self):
"""Closes the file.
......@@ -463,47 +476,3 @@ class CXIWriter:
self._file_is_open = False
if __name__ == '__main__':
import numpy
c1 = 0
c2 = 0
f1 = CXIWriter('test1.h5', )
f2 = CXIWriter('test2.h5', )
f1.add_stack_to_writer('detector1', '/entry_1/detector_1/data', numpy.random.rand(2, 2),
'frame:y:x')
f2.add_stack_to_writer('detector2', '/entry_1/detector_1/data', numpy.random.rand(3, 2),
'frame:y:x', compression=False, chunk_size=(1, 3, 2))
f1.add_stack_to_writer('counter1', '/entry_1/detector_1/count', c1)
f2.add_stack_to_writer('counter2', '/entry_1/detector_1/count', c2)
f1.write_simple_entry('detectorname1', '/entry_1/detector_1/name', 'FrontCSPAD')
f2.write_simple_entry('detectorname2', '/entry_1/detector_1/name', 'BackCSPAD')
f1.initialize_stacks()
f2.initialize_stacks()
a = numpy.random.rand(2, 2)
b = numpy.random.rand(3, 2)
c1 += 1
c2 += 2
f1.append_data_to_stack('detector1', a)
f2.append_data_to_stack('detector2', b)
f1.append_data_to_stack('counter1', c1)
f2.append_data_to_stack('counter2', c2)
f1.write_stack_slice_and_increment()
f2.write_stack_slice_and_increment()
f1.create_link('detectorname1', '/name')
f2.create_link('detectorname2', '/name')
f1.close_file()
f2.close_file()
doc/build/doctrees/cfelpyutils.doctree
+ 0
− 0
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doc/build/doctrees/environment.pickle
+ 0
− 0
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doc/build/html/cfelpyutils.html
+ 35
− 17
View file @ 6b062dbc
......@@ -232,23 +232,6 @@ the write_slice_and_increment.</p>
</table>
</dd></dl>
<dl class="method">
<dt id="cfelpyutils.cfel_cxi.CXIWriter.are_stacks_initialized">
<code class="descname">are_stacks_initialized</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="headerlink" href="#cfelpyutils.cfel_cxi.CXIWriter.are_stacks_initialized" title="Permalink to this definition"></a></dt>
<dd><p>Checks if stacks are initialized.</p>
<p>Checks the status of the stacks in the file and returns the status to the user.</p>
<table class="docutils field-list" frame="void" rules="none">
<col class="field-name" />
<col class="field-body" />
<tbody valign="top">
<tr class="field-odd field"><th class="field-name">Returns:</th><td class="field-body">True if the stacks are initialized, False otherwise</td>
</tr>
<tr class="field-even field"><th class="field-name">Return type:</th><td class="field-body">status (bool)</td>
</tr>
</tbody>
</table>
</dd></dl>
<dl class="method">
<dt id="cfelpyutils.cfel_cxi.CXIWriter.close_file">
<code class="descname">close_file</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="headerlink" href="#cfelpyutils.cfel_cxi.CXIWriter.close_file" title="Permalink to this definition"></a></dt>
......@@ -279,6 +262,24 @@ value of the overwrite parameter is True.</p>
</table>
</dd></dl>
<dl class="method">
<dt id="cfelpyutils.cfel_cxi.CXIWriter.file_is_full">
<code class="descname">file_is_full</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="headerlink" href="#cfelpyutils.cfel_cxi.CXIWriter.file_is_full" title="Permalink to this definition"></a></dt>
<dd><p>Checks if the file is full.</p>
<p>Checks if the file is full (i.e. the maximum number of slices have already been written), and returns the
information to the user.</p>
<table class="docutils field-list" frame="void" rules="none">
<col class="field-name" />
<col class="field-body" />
<tbody valign="top">
<tr class="field-odd field"><th class="field-name">Returns:</th><td class="field-body">True if the file is full, False otherwise.</td>
</tr>
<tr class="field-even field"><th class="field-name">Return type:</th><td class="field-body">status (bool)</td>
</tr>
</tbody>
</table>
</dd></dl>
<dl class="method">
<dt id="cfelpyutils.cfel_cxi.CXIWriter.get_file_handle">
<code class="descname">get_file_handle</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="headerlink" href="#cfelpyutils.cfel_cxi.CXIWriter.get_file_handle" title="Permalink to this definition"></a></dt>
......@@ -305,6 +306,23 @@ operations on the file that are not covered by CXI Writer API. Use it at your o
stacks can be added to the CXI Writer after initialization.</p>
</dd></dl>
<dl class="method">
<dt id="cfelpyutils.cfel_cxi.CXIWriter.stacks_are_initialized">
<code class="descname">stacks_are_initialized</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="headerlink" href="#cfelpyutils.cfel_cxi.CXIWriter.stacks_are_initialized" title="Permalink to this definition"></a></dt>
<dd><p>Checks if stacks are initialized.</p>
<p>Checks the status of the stacks in the file and returns the status to the user.</p>
<table class="docutils field-list" frame="void" rules="none">
<col class="field-name" />
<col class="field-body" />
<tbody valign="top">
<tr class="field-odd field"><th class="field-name">Returns:</th><td class="field-body">True if the stacks are initialized, False otherwise</td>
</tr>
<tr class="field-even field"><th class="field-name">Return type:</th><td class="field-body">status (bool)</td>
</tr>
</tbody>
</table>
</dd></dl>
<dl class="method">
<dt id="cfelpyutils.cfel_cxi.CXIWriter.write_simple_entry">
<code class="descname">write_simple_entry</code><span class="sig-paren">(</span><em>name</em>, <em>path</em>, <em>data</em>, <em>overwrite=False</em><span class="sig-paren">)</span><a class="headerlink" href="#cfelpyutils.cfel_cxi.CXIWriter.write_simple_entry" title="Permalink to this definition"></a></dt>
......
doc/build/html/genindex.html
+ 18
− 2
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......@@ -77,11 +77,13 @@
<a href="#A"><strong>A</strong></a>
| <a href="#C"><strong>C</strong></a>
| <a href="#D"><strong>D</strong></a>
| <a href="#F"><strong>F</strong></a>
| <a href="#G"><strong>G</strong></a>
| <a href="#I"><strong>I</strong></a>
| <a href="#L"><strong>L</strong></a>
| <a href="#P"><strong>P</strong></a>
| <a href="#R"><strong>R</strong></a>
| <a href="#S"><strong>S</strong></a>
| <a href="#W"><strong>W</strong></a>
</div>
......@@ -97,8 +99,6 @@
<li><a href="cfelpyutils.html#cfelpyutils.cfel_geom.apply_geometry_from_file">apply_geometry_from_file() (in module cfelpyutils.cfel_geom)</a>
</li>
<li><a href="cfelpyutils.html#cfelpyutils.cfel_geom.apply_geometry_from_pixel_maps">apply_geometry_from_pixel_maps() (in module cfelpyutils.cfel_geom)</a>
</li>
<li><a href="cfelpyutils.html#cfelpyutils.cfel_cxi.CXIWriter.are_stacks_initialized">are_stacks_initialized() (cfelpyutils.cfel_cxi.CXIWriter method)</a>
</li>
</ul></td>
</tr></table>
......@@ -141,6 +141,14 @@
</ul></td>
</tr></table>
<h2 id="F">F</h2>
<table style="width: 100%" class="indextable genindextable"><tr>
<td style="width: 33%; vertical-align: top;"><ul>
<li><a href="cfelpyutils.html#cfelpyutils.cfel_cxi.CXIWriter.file_is_full">file_is_full() (cfelpyutils.cfel_cxi.CXIWriter method)</a>
</li>
</ul></td>
</tr></table>
<h2 id="G">G</h2>
<table style="width: 100%" class="indextable genindextable"><tr>
<td style="width: 33%; vertical-align: top;"><ul>
......@@ -195,6 +203,14 @@
</ul></td>
</tr></table>
<h2 id="S">S</h2>
<table style="width: 100%" class="indextable genindextable"><tr>
<td style="width: 33%; vertical-align: top;"><ul>
<li><a href="cfelpyutils.html#cfelpyutils.cfel_cxi.CXIWriter.stacks_are_initialized">stacks_are_initialized() (cfelpyutils.cfel_cxi.CXIWriter method)</a>
</li>
</ul></td>
</tr></table>
<h2 id="W">W</h2>
<table style="width: 100%" class="indextable genindextable"><tr>
<td style="width: 33%; vertical-align: top;"><ul>
......
doc/build/html/objects.inv
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− 0
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doc/build/html/searchindex.js
+ 1
− 1
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