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Created with Raphaël 2.2.027Feb23Aug2221201923Jul221Jun21Mar28Jul29Jun28191716151287Remove mpi4py from dependencies0.0.1 main0.0.1 mainMerge branch 'feat/powder' into 'main'Merge branch 'feat/sfx-mask-snr-param' into 'main'Add snr parameter to sfx hot-pixels maskDraw circles on image using unrefined geometryUpdate powder notebookAdd update of JF4M update by motorsAdd plot of rings on original image, fix number of visible rings, fix radial profile limitsFix log and divide warningsAdd background estimation parameters to find_center scriptAdd options for output filename with run and proposal placeholdersUse dict with detector-related parametersUse finite mask looking for minimum value of log-scaled imageUse sigma in mm in gaussian threshold to avoid dependence on pixel sizeFix minimum lenght in fast azimuthal integration (numpy.bincount)Add calibrant datafiles in MANIFEST.inFix definition of user mask array if it is not specified Update dependenciesUse MPI version and SLURM mulitnode allocation in notebook for powder diffractionFix the use of detector sourceMove ImageAgg into separate module (file)Fix typoAdd MPI version of image averaging (powder-sum)Initial implementation of center refinement using powder diffraction dataMerge branch 'feat/detector-layouts' into 'main'Add detector layout in sfx geometry refinementMerge branch 'feat/crystfel-mask' into 'main'Fix xwiz unit_cell file parameter nameUse detector shape from geometry to make maskUse resolution/pixel size from geometry fileWrite detector resolution in crystfel geometry file, fix type issue for binary mask bitwise operationsFix rigid_group parameter of refine_geometry in optimiser.pyCreate empty mask if there is no mask in crystfel geometry fileMove get_detector_shape and pixels_to_image into detector.geomAdd reading and writing crystfel mask, update read mask with hotpixels maskAdd bad pixels to sfx geometry reportAdd mask functions to the geomtools root package, sort importsAdd option to draw data without antialiasing, and turn off colorbarAdd generation of bad pixels mask in the optimiserAdd function which returns detector shape

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