Commits · 4e93002dedc09ff34f0976e6ed4fec9b9f24f6c8 · calibration / pycalibration · GitLab

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Dec 06, 2021
- Remove some unused settings · 4e93002d
  Thomas Kluyver authored 3 years ago
  
  4e93002d
Dec 01, 2021
- Remove unused code to automatically select Slurm reservation · 89971d05
  Thomas Kluyver authored 3 years ago
  
  89971d05
Nov 15, 2021
- Allow for notebook with no markdown cells · 64109856
  Thomas Kluyver authored 3 years ago
  
  64109856
Nov 12, 2021
- Use attribute access for args object · 53c3bace
  Thomas Kluyver authored 3 years ago
  
  53c3bace
- Correct numbers of blank lines · 72968d6a
  Thomas Kluyver authored 3 years ago
  
  72968d6a
- isort imports · 69a87b0a
  Thomas Kluyver authored 3 years ago
  
  69a87b0a
- No longer need to modify global notebooks dictionary · e8e5df10
  Thomas Kluyver authored 3 years ago
  
  e8e5df10
- Improve warnings/errors around concurrency parameter · 7cfe3c34
  Thomas Kluyver authored 3 years ago
  
  7cfe3c34
- Refactor parsing command line args & loading main notebook · d784e473
  Thomas Kluyver authored 3 years ago
  
  d784e473
- Accept argv as input to various functions · 536bfed6
  Thomas Kluyver authored 3 years ago
  
  536bfed6
- Extract functions relating to notebook arguments to a new module · 00a0ad26
  Thomas Kluyver authored 3 years ago
  
  00a0ad26
Nov 10, 2021
- Clarify reproducibility warnings and replace confirmation prompt by early exit · bea42570
  Philipp Schmidt authored 3 years ago
  
  bea42570
Nov 09, 2021
- Queue finalize job in upex-middle rather than exfel · 77f7b3b2
  Philipp Schmidt authored 3 years ago
  
  77f7b3b2
Oct 21, 2021
- Add --not-reproducible flag to xfel-calibrate to skip confirmation · 7981f6d2
  Philipp Schmidt authored 3 years ago
  
  7981f6d2
- Add warning to xfel-calibrate if configuration may cause result to not be reproducible · 6adc6b7a
  Philipp Schmidt authored 3 years ago
  
  6adc6b7a
- Add --skip-env-freeze flag to xfel-calibrate to skip pip freeze step · 85ddd210
  Philipp Schmidt authored 3 years ago
  
  85ddd210
Oct 20, 2021
- fix finalize.py script · 5de9fde2
  Karim Ahmed authored 3 years ago
  
  5de9fde2
- [CORRECT] Fix title reports for multiple detectors per run folder · 108a0813
  Karim Ahmed authored 3 years ago
  
  108a0813
- Fix slurm's nice flag formatting · f3ee65fc
  Cyril Danilevski authored 3 years ago
  
  f3ee65fc
Oct 19, 2021
- Add xfel-calibrate option to skip report generation · f312e1f5
  Philipp Schmidt authored 3 years ago
  
  f312e1f5
- Check source and destination shape in agipdalgs.transpose_constant · 328d0bc8
  Philipp Schmidt authored 3 years ago
  
  328d0bc8
- Add native implementation for transposition of AGIPD constants · 276be77d
  Philipp Schmidt authored 3 years ago
  
  276be77d
Oct 18, 2021
- Fix missing memory cell index in SlopesPC constant sanitization · fc13b220
  Philipp Schmidt authored 3 years ago
  
  fc13b220
Oct 17, 2021
- Fix missing string conversion for slurm-scheduling argument · 55b7c136
  Philipp Schmidt authored 3 years ago
  
  55b7c136
Oct 11, 2021
- Optimize loading order for AGIPD data to exit early with train filtering · b6ff3c1b
  Philipp Schmidt authored 3 years ago
  
  b6ff3c1b
- Add support to only correct specific train IDs in agipdlib.AgipdCorrections · f46d2081
  Philipp Schmidt authored 3 years ago
  
  f46d2081
Oct 08, 2021
- legacy_colorbar setting has no effect in matplotlib 3.4+ · abfb9460
  Thomas Kluyver authored 3 years ago
  
  abfb9460
Oct 06, 2021
- Move BadPixelsFF to cal_tools.agipdutils_ff and clarify internal usage · 9c60cfd0
  Philipp Schmidt authored 3 years ago
  
  9c60cfd0
- Only use bad pixels from darks in agipdutils.baseline_correct_via_stripes · 6ccdf587
  Philipp Schmidt authored 3 years ago
  
  6ccdf587
Oct 05, 2021
- check_output() takes an input kwarg, check_call() doesn't · 12752fb3
  Thomas Kluyver authored 3 years ago
  
  12752fb3
- Only make job table template if Slurm jobs used · bc36cca3
  Thomas Kluyver authored 3 years ago
  
  bc36cca3
- Block Sphinx & Latex from waiting for interactive input · 47ab18fd
  Thomas Kluyver authored 3 years ago
  
  47ab18fd
- Don't call sacct in finalize if there are no Slurm jobs involved · 8f16a8fc
  Thomas Kluyver authored 3 years ago
  
  8f16a8fc
- No need to wait for Slurm jobs in finalize.py · 373cd929
  Thomas Kluyver authored 3 years ago
  
  The finalize step is now always separate from processing, and we rely on Slurm's dependency system to ensure it runs after they finish. So we don't need to wait for them to finish.
  373cd929
Oct 01, 2021
- Use explicit local dir so script can run directly · 76817ab7
  Thomas Kluyver authored 3 years ago
  
  76817ab7
- Clarify how dep_job_ids changes · 7b23765a
  Thomas Kluyver authored 3 years ago
  
  7b23765a
Sep 29, 2021
- Rename JobGroup -> JobChain, add docstrings · 4e64ee3d
  Thomas Kluyver authored 3 years ago
  
  4e64ee3d
Sep 24, 2021
- Update out-folder in calibration_metadata.yml on repeat · 57cc19e0
  Thomas Kluyver authored 3 years ago
  
  57cc19e0
- Mention new= in CalibrationMetadata docstring · 2c4dd373
  Thomas Kluyver authored 3 years ago
  
  2c4dd373
- Add xfel-calibrate --constants-from option to reuse constant info from a calibration_metadata.yml · 172adc2f
  Thomas Kluyver authored 3 years ago
  
  172adc2f

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