Commits · 8f16a8fce88a387e4ffeafd80a64396f07fab7c4 · calibration / pycalibration · GitLab

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Oct 05, 2021
- Don't call sacct in finalize if there are no Slurm jobs involved · 8f16a8fc
  Thomas Kluyver authored 3 years ago
  
  8f16a8fc
- No need to wait for Slurm jobs in finalize.py · 373cd929
  Thomas Kluyver authored 3 years ago
  
  The finalize step is now always separate from processing, and we rely on Slurm's dependency system to ensure it runs after they finish. So we don't need to wait for them to finish.
  373cd929
Oct 01, 2021
- Use explicit local dir so script can run directly · 76817ab7
  Thomas Kluyver authored 3 years ago
  
  76817ab7
- Clarify how dep_job_ids changes · 7b23765a
  Thomas Kluyver authored 3 years ago
  
  7b23765a
Sep 29, 2021
- Rename JobGroup -> JobChain, add docstrings · 4e64ee3d
  Thomas Kluyver authored 3 years ago
  
  4e64ee3d
Sep 24, 2021
- Update out-folder in calibration_metadata.yml on repeat · 57cc19e0
  Thomas Kluyver authored 3 years ago
  
  57cc19e0
- Mention new= in CalibrationMetadata docstring · 2c4dd373
  Thomas Kluyver authored 3 years ago
  
  2c4dd373
- Add xfel-calibrate --constants-from option to reuse constant info from a calibration_metadata.yml · 172adc2f
  Thomas Kluyver authored 3 years ago
  
  172adc2f
- Ignore existing calibration_metadata.yml in xfel-calibrate · d356d0e8
  Thomas Kluyver authored 3 years ago
  
  d356d0e8
- Copy bash script to run notebook to working directory · e9bdc837
  Thomas Kluyver authored 3 years ago
  
  e9bdc837
- Apply suggestion to src/xfel_calibrate/calibrate.py · 7d03a959
  Thomas Kluyver authored 3 years ago
  
  7d03a959
- Need a Path object, not a str · 4d35534c
  Thomas Kluyver authored 3 years ago
  
  4d35534c
- Copy calibration_metadata.yml when --prepare-only is used · b2d76a6b
  Thomas Kluyver authored 3 years ago
  
  b2d76a6b
- Add --prepare-only option for xfel-calibrate · cfa9e8ab
  Thomas Kluyver authored 3 years ago
  
  cfa9e8ab
- Fix user venv test · f9c00f3e
  Thomas Kluyver authored 3 years ago
  
  f9c00f3e
- Save string path to python instead of Path object in YAML · 0afe5941
  Thomas Kluyver authored 3 years ago
  
  0afe5941
- Fix tests · 03fa7969
  Thomas Kluyver authored 3 years ago
  
  03fa7969
- Rethink what information goes in which file · 0f55c690
  Thomas Kluyver authored 3 years ago
  
  0f55c690
- Update report path when it's in output path · c4be4941
  Thomas Kluyver authored 3 years ago
  
  c4be4941
- Ensure out-folder is created as a directory · 0d5cd44a
  Thomas Kluyver authored 3 years ago
  
  0d5cd44a
- Allow repeating calibration with a different output folder · 6d307918
  Thomas Kluyver authored 3 years ago
  
  6d307918
- Fix getting report path from metadata · bc4c721d
  Thomas Kluyver authored 3 years ago
  
  bc4c721d
- Run finalize step after repeating task · bb3a6a25
  Thomas Kluyver authored 3 years ago
  
  bb3a6a25
- Initial work towards re-running calibration job · 61688e6d
  Thomas Kluyver authored 3 years ago
  
  61688e6d
- Make class to store Slurm related options · 4e26f4df
  Thomas Kluyver authored 3 years ago
  
  4e26f4df
- Use CWD for notebook paths · 8bf6fb7e
  Thomas Kluyver authored 3 years ago
  
  8bf6fb7e
- after_ok and after_any are optional · d2fce235
  Thomas Kluyver authored 3 years ago
  
  d2fce235
- Fix pip command · 171f495d
  Thomas Kluyver authored 3 years ago
  
  171f495d
- Initial prototype of describing jobs for reproducing work · 9b6e0cf1
  Thomas Kluyver authored 3 years ago
  
  9b6e0cf1
Sep 21, 2021
- FIX - Recreate folder if sphinx-rep already existed and fix warning message... · d880f019
  Karim Ahmed authored 3 years ago
  
  FIX - Recreate folder if sphinx-rep already existed and fix warning message for concurrency parameter.
  d880f019
- Append to .out files for pre-emptable finalize job · 7c7289a5
  Thomas Kluyver authored 3 years ago
  
  7c7289a5
Sep 17, 2021
- Apply suggestion to src/cal_tools/agipdlib.py · 34b32843
  Karim Ahmed authored 3 years ago
  
  34b32843
- modify validate_selected_pulses · 05c53c24
  Karim Ahmed authored 3 years ago
  
  05c53c24
- use bitwise logical and · f1e633b4
  Karim Ahmed authored 3 years ago
  
  f1e633b4
- keep using pulse range instead of pulse_list · 28a16411
  Karim Ahmed authored 3 years ago
  
  28a16411
Sep 16, 2021
- MR suggestions · 5609b5f4
  Karim Ahmed authored 3 years ago
  
  5609b5f4
Sep 14, 2021
- modify validate_selected_pulses · 8e41c87a
  Karim Ahmed authored 3 years ago
  
  8e41c87a
Sep 13, 2021
- Modify max_pulses based on operating memory cells · 0e977ea3
  Karim Ahmed authored 3 years ago
  
  0e977ea3
Sep 10, 2021
- Remove unused import · 7a6b505b
  Thomas Kluyver authored 3 years ago
  
  7a6b505b
- Simplify getting command line arguments to fill notebook template path · 33376963
  Thomas Kluyver authored 3 years ago
  
  33376963

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