Karim Ahmed authored 9 months ago and Thomas Kluyver committed 3 months ago

- Replace send_to_db and storing local h5 constant file with write_ccv and inject_ccv
- Replace get_to_db with CalibrationData API
- Get pdu using calibration_client and have a da_to_pdu dict.
- Refactor code based on the new da_to_pdu dict and remove unused variables.
- Bonus: use calcat_creation_time

- Original function Single Cell:
Average time: 1.879472 seconds
Min time: 1.874208 seconds
Max time: 1.882767 seconds

- Cython function Single Cell:
Average time: 0.603006 seconds
Min time: 0.602453 seconds
Max time: 0.603634 seconds

Speedup: 3.12x

- Original function Burst Mode:
Average time: 17.192991 seconds
Min time: 17.174598 seconds
Max time: 17.211236 seconds

- Cython function Burst Mode:
Average time: 1.242232 seconds
Min time: 1.230240 seconds
Max time: 1.258492 seconds

Speedup: 13.84x

refactor:
- chunk_multi: name changed and returns now a list of np.ndarray chunks
- fill_histogram: input argument now is np.ndarray.

test:
Added tests for fill_histogram, chunk_multi, and _peak_position