Commits · e7ace9dbe22a4b0295c1442c60686ebab08d2790 · Machine Learning projects. / pes_to_spec · GitLab

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Jan 31, 2023
- Added missing import. · e7ace9db
  Danilo Ferreira de Lima authored 2 years ago
  
  e7ace9db
- Fix and parallelize inference of the compatibility per channel. · 753dec56
  Danilo Ferreira de Lima authored 2 years ago
  
  753dec56
- Corrected compatibility check. · 0c23a584
  Danilo Ferreira de Lima authored 2 years ago
  
  0c23a584
- Corrected PCA fit. · 35d0b3db
  Danilo Ferreira de Lima authored 2 years ago
  
  35d0b3db
- Fit per channel PCA model. · 3eccafc4
  Danilo Ferreira de Lima authored 2 years ago
  
  3eccafc4
- Checking compatibility per channel. · 001c98ab
  Danilo Ferreira de Lima authored 2 years ago
  
  001c98ab
Jan 26, 2023
- MErged. · a7323718
  Danilo Ferreira de Lima authored 2 years ago
  
  a7323718
- Nicer plots · ec56e181
  Danilo Ferreira de Lima authored 2 years ago
  
  ec56e181
Jan 25, 2023
- Merged. · 7e6c4926
  Danilo Ferreira de Lima authored 2 years ago
  
  7e6c4926
- Smoothing the spectrum in test · 787238bc
  Danilo Ferreira de Lima authored 2 years ago
  
  787238bc
- Restored smoothened spectrum. · d8a4a29a
  Danilo Ferreira de Lima authored 2 years ago
  
  d8a4a29a
Jan 24, 2023
- Merge branch 'incrementalPCA' into 'main' · 59e00499
  Danilo Enoque Ferreira de Lima authored 2 years ago
  
  Switched to ARDRegression to keep the code more maintainable See merge request !4
  59e00499
- Merge branch 'main' into incrementalPCA · 54f343e5
  Danilo Ferreira de Lima authored 2 years ago
  
  54f343e5
- Commented out older model to remove the autograd dependency. · 8b96c8bb
  Danilo Ferreira de Lima authored 2 years ago
  
  8b96c8bb
Jan 23, 2023
- Better plots. · b623decd
  Danilo Ferreira de Lima authored 2 years ago
  
  b623decd
- Clean up. · cda5dbe8
  Danilo Ferreira de Lima authored 2 years ago
  
  cda5dbe8
Jan 20, 2023
- Switched to incremental PCA to check its impact. · ef42358a
  Danilo Ferreira de Lima authored 2 years ago
  
  ef42358a
- Added debugging messages, using parallelization by default, disabled slow and... · cde3eebf
  Danilo Ferreira de Lima authored 2 years ago
  
  Added debugging messages, using parallelization by default, disabled slow and probably useless refined peak finding, added function to find match between two train IDs.
  cde3eebf
Jan 18, 2023
- Typo fix. · 5aff4e8e
  Danilo Ferreira de Lima authored 2 years ago
  
  5aff4e8e
- Added function to retrieve low res range. · 8842f776
  Danilo Ferreira de Lima authored 2 years ago
  
  8842f776
- Disable the nonlinear kernel by default for speed. · 24b3f47f
  Danilo Ferreira de Lima authored 2 years ago
  
  24b3f47f
Jan 16, 2023
- Added method to return x-axis from high resolution data. · fe32298d
  Danilo Ferreira de Lima authored 2 years ago
  
  fe32298d
- Added method to get channels used in training. · 7a38ac2d
  Danilo Ferreira de Lima authored 2 years ago
  
  7a38ac2d
- Merge branch 'nystroem' into 'main' · df5e42c9
  Danilo Enoque Ferreira de Lima authored 2 years ago
  
  Added kernel approximation with the Nystroem sub-space projection method as an alternative See merge request !3
  0.0.1
  
  df5e42c9
Jan 13, 2023
- Included Nystroem's rank. · 9f64ef68
  Danilo Ferreira de Lima authored 2 years ago
  
  9f64ef68
- Added pre-PCA step before Nystroem to reduce the dimensionality in advance. · 3b1b5aa3
  Danilo Ferreira de Lima authored 2 years ago
  
  3b1b5aa3
- Added Nystroem with an insane kernel dimensionality to check if it improves something. · 2e3f6d06
  Danilo Ferreira de Lima authored 2 years ago
  
  2e3f6d06
Jan 12, 2023
- Using ARDRegressor instead of BFGS to avoid using special code. · 44353618
  Danilo Ferreira de Lima authored 2 years ago
  
  44353618
Jan 11, 2023
- Draft. · b695793c
  Danilo Ferreira de Lima authored 2 years ago
  
  b695793c
- Added Nystroem kernel as a possible nonlinearity. · 5f1f7bd1
  Danilo Ferreira de Lima authored 2 years ago
  
  5f1f7bd1
Jan 10, 2023
- Merge branch 'kernelPCA' into 'main' · f3d98448
  Danilo Enoque Ferreira de Lima authored 2 years ago
  
  Add Kernel PCA as an alternative preprocessing step See merge request !1
  f3d98448
- Allow for no smoothing. · eed28bdc
  Danilo Ferreira de Lima authored 2 years ago
  
  eed28bdc
- Merged and removed whitening in targets. · c4fa650d
  Danilo Ferreira de Lima authored 2 years ago
  
  c4fa650d
- Merge branch 'save' into 'main' · dde729ab
  Danilo Enoque Ferreira de Lima authored 2 years ago
  
  Restructured code to use classes compatible with joblib and minimize hacks when saving See merge request !2
  dde729ab
- Avoid using the pipeline when calculating unc. · d7855b9d
  Danilo Ferreira de Lima authored 2 years ago
  
  d7855b9d
- Fixed compatibility check calculation. · f8eac915
  Danilo Ferreira de Lima authored 2 years ago
  
  f8eac915
Jan 09, 2023
- Fixed uncertainty calculation. · a79d9d65
  Danilo Ferreira de Lima authored 2 years ago
  
  a79d9d65
- Bug fixes. · 526aaf25
  Danilo Ferreira de Lima authored 2 years ago
  
  526aaf25
- Using two pipelines to split more evenly the preprocessing steps. · 8323a157
  Danilo Ferreira de Lima authored 2 years ago
  
  8323a157
- Reduced number of components in Kpca. · 1ca0f7cb
  Danilo Ferreira de Lima authored 2 years ago
  
  1ca0f7cb

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